Gene Fjoh_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3992 
Symbol 
ID5089945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4776554 
End bp4777639 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content38% 
IMG OID644743413 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_001196321 
Protein GI146301730 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTACA ATACAAAAGC TAAAGAACTC TTAGGAATTG ATTATCCAAT TTTACAAGGA 
CCTTTTGGAG GCAATTTATC AAGTGTAGAA TTAACCGCTG CAGTTTCTAA TGCAGGCGGA
TTAGGCGGTT ATGGAGTTTA TACAATGAGT CCGCAGGAAA TTTTCGACAT TGATAAACAG
TTAAAAGCAG CCACAAATAA ACCCTATAAT ATCAATCTTT GGGTTTCAGA CCATGATATT
CCCGAAGGCG GTTTAACCGA TGAACAGTTT GAGAAAACAA AAGCCGTTTT TAAACCGTAT
TATGATGAAG CTGGAATCGC ACTTCCGGAA AAACCAGCTC CATTTCAATC TAGATTTGAA
AATCAGCTGC AGGTAATTTT AGACGTTAAG CCAAAAGTTT TCAGTTTTAT GTTTGGCGTT
CCCTCAGATG ATGTTTTAGA ACAATGCCGA AAATCAGGAA TTGTAACAGT TGGAGCTGCA
ACAACTCTCG ATGAAGCTGT TTTTTTGGAC AGCAAAGGCG TTGATATGAT TATTGCTTCT
GGTTTTGAAG CAGGCGGACA TCGTCCTTCT TTTTTAGATA AATCTGAAGT TTCTTTAACC
GGAACTTTTG TTCTATTGCA GTTAATGCGC GAAAAAATAA AAACACCCAT AATTGTAGCC
GGCGGCATTG CTGATGGAAA AGGAATTGCA GCAGCTTTAA CATTAGGAGC AAGTGCTGCG
CAAATAGGAA CCGCTTTTTT AGCTACAGAC GAATCTAATG CACTGCCAAT TCATAGAGAA
ATGCTGTTTT CTGATGCTGC AAAATACACC ACACTTTCAC GCGCTTACAC AGGAAGACTC
GGACGCGGGA TTACAAGCCG GCTTGCTAAA GATATAATGG GAAAAGAATC AGATATTCTG
CCTTTTCCAT TACAGACTAC TTTTATTGCT CCACTGCGAA AAGCAGCGCT TGATAAACAA
AAATGGGATA TGATATTATT TTGGGGCGGT CAGATTTCTC CAATTTTAAA ACATACTAAA
GCTTCTGTTT TGATGAATGC TTTGATTGAA GAAACTACAG CTTATTTTGA TGGATTAAAA
TCATAA
 
Protein sequence
MWYNTKAKEL LGIDYPILQG PFGGNLSSVE LTAAVSNAGG LGGYGVYTMS PQEIFDIDKQ 
LKAATNKPYN INLWVSDHDI PEGGLTDEQF EKTKAVFKPY YDEAGIALPE KPAPFQSRFE
NQLQVILDVK PKVFSFMFGV PSDDVLEQCR KSGIVTVGAA TTLDEAVFLD SKGVDMIIAS
GFEAGGHRPS FLDKSEVSLT GTFVLLQLMR EKIKTPIIVA GGIADGKGIA AALTLGASAA
QIGTAFLATD ESNALPIHRE MLFSDAAKYT TLSRAYTGRL GRGITSRLAK DIMGKESDIL
PFPLQTTFIA PLRKAALDKQ KWDMILFWGG QISPILKHTK ASVLMNALIE ETTAYFDGLK
S