Gene Fjoh_3977 details

Gene Information

• Locus tag: Fjoh_3977
• ID: 5089930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 4761850
• End bp: 4763877
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 644743398
• Product: signal transduction histidine kinase, LytS
• Protein accession: YP_001196306
• Protein GI: 146301715
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3275] Putative regulator of cell autolysis

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.932944
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCCAAA AAATCACAAT TGATCTTCAA AATTTCAGAA AACAAAAACG GCTTTTTTAT 
GTTTTGTTTT TGGTTTTAAC TGCATTCAAA ATTCAGGCAC AAGATATTTC TCCTATCGAA 
AAAATAGCAG CAGAAGGATA TGCAAAACGT TTTTCTGATA CTGTTTCCTG TATAAAAATT 
CAGAAACAGG CACTTCATCT TGCACACAAG AATAAGAACA AGGAAGACGA AGTAATTAGT 
TATGCTTATC TGGCGCTTAC CCAAAGACGA TTGCTTCATT TAAAAGAGTT TATGCATTAT 
GCAGATACGG CTTTTTATCT TTCGCAGCAT ATAACTAAAA TAAGAGCAAA AGCCCATGCA 
TCGGCTGCAA TGGGATCTTT AAAATCTTAT ATTGAAGACA AGCCCCAGGC ATTGAATTAT 
TTATTAGAAG CCTATACATT ATTTTCTAAA GTCAATGCAC ACGATCAATG TGCTAAAATT 
GCTTCGGATA TTTCGTATTT GTTTTCTCCG GCATCGCCTA CCAAAGTCGA AAAATATGCC 
AGAGAAGCCC TTGCACATGC AGAAAAATCC GGTGATGCAG AAAGCCAATT GTATGCAAGG 
CTTGCTTTTG GCGGTTTTTT GGCAGATAAT TTAGAAACGG GCGGGATTTT AGAATGGGCA 
GCGGCGGTTA AGTTTTTTGA AGAAACAGTC GCTTTGGCTG AAAAAAATGC AGACAAAATT 
GTGAGCAAAA GTAATATTGG AATTGCTTAT GTAAATCTGG CTGATCTTTA TACAAAAGGA 
CCAAAGCCTA TAGATGAAAA AGCTTTTTTG TGGAATCTGC AAAAAGCAGA AAGTATTGCG 
AAAAAGTATA ATGTGAAAAT TATTCTGCGA AGTGCCATTG GACTAAAAGG GTATTATTTT 
ATGCAAAAGG GCGATTATAT TAGGGCTGAA CTTCTTTTTA CAGAAGGTAT TAATTATCAA 
AAAAGCCTGC CGTATACAGA TAATTATCTT TTTACTGCTT TTTACAAGAG TTTAAAAGAT 
GTTGCGGTAA AGAGAAAAGA TTTTCAGGCG TATTACGGTT ACGATACACT TTATTCAAAA 
TATACTCAGT TAAAATATAA GGAATCTACG CAGGCGCTGC TTCAAAATGC AGATGCCCGT 
TACGAATCTT CTAAAAAAGC AGAAAGAATC AAACAGCTGG AACTGGAAAA AGAACTGGAG 
CAGAAGAATA AATTATTGGG TTATGGTATT GCGGGCGTAT TGTTAATTGG TCTTGTATTT 
ATGTTTCGTT CGTATTATTA CCGCCAGCGT TATTATCAAA ACAGAGAAGA TTTTCTAAAG 
CAGGAGCAGG TGCATAACGA ACTTAAAATG CAGCTGATGG AAAAGGAAAC GATCGAAAAT 
CTGGCTGCGC GATTGTCACT CGAAAGAAGA TTGCTGCGTT CGCAGATGGA TCCGCATTTC 
ATTTTTAATG CTTTAGGGAA TATCCAAAGC ATGATTTTAC AAAAAGATAC TATTCCTGCG 
GTTTCGTATT TAAATAAATT TGCCAAGCTC ACCAGACAGG TTTTAGAGCA GTCGCGAAAA 
GAAACCATTT CGCTGGAAGA GGAAATTAAT ACTTTAAAAA ATTATATCGA ATTGCAGCAG 
CTTCGTTTAA ATAATGGTTT TGATTATGTT ATTGAATGTG ATGAAAATGT TGAAACTGAT 
ATTTTGATAC CGCCTCTGCT CATTCAGCCG TTTATAGAAA ATGCGGTCGA ACATGGTTTA 
AAACCTCAGG AAAATAGTGT AAAAGGTTTG ATCGAAATTT ATTTTAAAGA AGATGAAGAA 
CAGCACAGTT TAATTTGTAC GATTAAGGAC AACGGAATTG GATTAGCGGC TTCGAGAAAA 
TTAAAAATAA ACGATACGCA TCAGTCGCTT TCGACTACCA TTACTGACGA AAGGCTGTCT 
AAAATGCAGA AAGAAAACCC AAATGCCGGA TTTACGGTTA AGGAACGTGA TCCTGAAACT 
GACGGCCGCG GTTGTATAGT AATTCTAAAT ATCCCGATTT TATCATGA 

 

Protein sequence

MLQKITIDLQ NFRKQKRLFY VLFLVLTAFK IQAQDISPIE KIAAEGYAKR FSDTVSCIKI 
QKQALHLAHK NKNKEDEVIS YAYLALTQRR LLHLKEFMHY ADTAFYLSQH ITKIRAKAHA 
SAAMGSLKSY IEDKPQALNY LLEAYTLFSK VNAHDQCAKI ASDISYLFSP ASPTKVEKYA 
REALAHAEKS GDAESQLYAR LAFGGFLADN LETGGILEWA AAVKFFEETV ALAEKNADKI 
VSKSNIGIAY VNLADLYTKG PKPIDEKAFL WNLQKAESIA KKYNVKIILR SAIGLKGYYF 
MQKGDYIRAE LLFTEGINYQ KSLPYTDNYL FTAFYKSLKD VAVKRKDFQA YYGYDTLYSK 
YTQLKYKEST QALLQNADAR YESSKKAERI KQLELEKELE QKNKLLGYGI AGVLLIGLVF 
MFRSYYYRQR YYQNREDFLK QEQVHNELKM QLMEKETIEN LAARLSLERR LLRSQMDPHF 
IFNALGNIQS MILQKDTIPA VSYLNKFAKL TRQVLEQSRK ETISLEEEIN TLKNYIELQQ 
LRLNNGFDYV IECDENVETD ILIPPLLIQP FIENAVEHGL KPQENSVKGL IEIYFKEDEE 
QHSLICTIKD NGIGLAASRK LKINDTHQSL STTITDERLS KMQKENPNAG FTVKERDPET 
DGRGCIVILN IPILS