Gene Fjoh_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3969 
Symbol 
ID5089922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4741678 
End bp4742730 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content29% 
IMG OID644743390 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_001196298 
Protein GI146301707 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.260547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATCT TTGAAAAAAA TTACAAAAAC ATGCATAAGG GAACTTTATC AAAAAAAGCA 
GAAATACTAA TTCATATTGT CTACTGGTTT TTGATGGCCT ATTTTACATT CATTAAAAAC
CCAATACGAG CAAGACTTTA TGTGCCGGAT TTGTTTTTTA TAACCTATCT GATTGTTTTT
ATCCTTACTT TCTATTTTCA TTATTTCGCA GTAATGAAAT TCGTTTTTAA ATCCTTTCAA
TGGAAAAGAT TTTTTGCAGG CGTTCTCGTT TCTTATTTGT TTTTTACAGC TTTAAGATGG
CTGATTGAGC AGGTTATAAC TCATATTTTA TTTCAAAGAA TAAATTATAC CAATACTGCA
TTTTTAAATT ATATGTTCGA TAATCTGCAA TACAGCAGTA TGCCGATTAT TTTGAGTTCC
CTGCTTTGGT TTGTTATTTA TTTTATCCGT CTTTTAGAGT ACAACCAGAT TATTTTAGAA
GAAAACAAAA GCACGGAGAT TAAATTTTTG AAAGCCCAGA TAAACCCGCA TTTTATTTTT
AATACGCTCA ATAATATTTA TTCGATGGTT TATTTTCAGT CGGACAAATC GTTAACAGCG
ATCGAAAAAC TGAGTCAGAT TATGCGGTTT ACGACTTACG AATCGCAGAA AGAAAAGATT
AAATTATCAG ATGAAATCGA TTATATAAAA GCTTATATCG AGCTCGAACA ACTAAGACAT
CAGGAAACTG CTTTTGTTGA TTTGAAAACC GAAACCGAAA ATGAGTTCGA AGAAATTCCG
CCTTATATTT TATCACCTTT AATTGAAAAT GCTTTAAAAC ACGGCAAAAC TTCTACAGAA
AATCCTATTA CAATTGATTT AAAAGTAAAA GACAAAAAAC TCATTTTTAA AGTTCTAAAT
GATATTGGAA CACAAAAAAA AGACAAACTG GGAGGAATTG GATTAGAAAA CCTCAAAAAA
CGATTAGAAA TATATTATCC GCAAAAACAT CAAATAAAAT TTACGAACCA AAACAATCAG
TTTACAGCCG AACTTGAAAT AGATTTAAAA TGA
 
Protein sequence
MYIFEKNYKN MHKGTLSKKA EILIHIVYWF LMAYFTFIKN PIRARLYVPD LFFITYLIVF 
ILTFYFHYFA VMKFVFKSFQ WKRFFAGVLV SYLFFTALRW LIEQVITHIL FQRINYTNTA
FLNYMFDNLQ YSSMPIILSS LLWFVIYFIR LLEYNQIILE ENKSTEIKFL KAQINPHFIF
NTLNNIYSMV YFQSDKSLTA IEKLSQIMRF TTYESQKEKI KLSDEIDYIK AYIELEQLRH
QETAFVDLKT ETENEFEEIP PYILSPLIEN ALKHGKTSTE NPITIDLKVK DKKLIFKVLN
DIGTQKKDKL GGIGLENLKK RLEIYYPQKH QIKFTNQNNQ FTAELEIDLK