Gene Fjoh_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3946 
Symbol 
ID5089899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4707398 
End bp4708453 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content35% 
IMG OID644743367 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001196275 
Protein GI146301684 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACCCAA ATTTCAAAAT TTTACCAGAG AAAAATAAAA TTGATCTAAA AGCAAGAATT 
GCCGAAAGTA TTGCATTAGA GAAACAACGT GCCAGAAGAA AAAGGCTTCG CACAATTTCT
TGGAGTGCTG CTGCTGTACT TTGCTTAGGA TTAGGAATTA CCATTGTATT AAAACAGGAA
CAAAAAGAAA TAAGCCCAAT TGAACAGTTT GCCAACAACA ATAAAACAAG CGGTTCTTCT
TTTGAAAAAA GCAATCAGGT GCAGCTGGTT TTATCAGATA AAGAAGCTGT TAATGTAAGC
GACAGCACAA CAATAGCTTA TGATGCCTCA GGAAATAAAA TCAGCGTTAA CAACAAACAG
ATTAAACAGA AAAATTCTCT TGAACCGCAA TACAATACCG TTTTAGTACC GTATGGAAAA
AGAGCACAGC TAAGCCTTGC CGACGGAACT CAGGTTTGGC TCAATTCAGG ATCAAAACTA
ATTTATCCTA CCACTTTTGA CGGCTCATCA AGAGAAGTGT TTTTAGAAGG AGAAGGAATT
TTTGATGTAG CACATAATGC TTCAAAACCT TTTTATGTAA AAGCAGCGAA TAATTACAGC
GTGCGTGTAT TAGGAACCTT GTTTAATGTA AGCTGTTATG CAAAAGATGC TAAAGTTTCG
ACAGCACTTT TAAGAGGAAA AGTACAGGTT TCTTATGCTA AAAAAGGTCT TTTTAGTTCA
GATACGCTTC AGACAATTTT AAAACCTGGA ACAATTGCTT CTTTAGATAA AAAACGAGAA
ACAATTAAAA CCACTGCACA AAATGTCGAG CCTTTGTTTT CATGGAGAAA AGGATATTAC
GAATTCTCTC AGGAAAAACT TCCGCTGGTT TTAGACAAAT TAACGCGCTA TTATAATGTT
GATTTTGTAA TGAACAAAAA AGTAAGTTCC GGCGAAACAT ATTCAGGAGC TTTTAAACTT
AACGATGATT TAGATAAAGT GGTAAAAACA TTAGAAGCCA CTACAGGATT CGAATTCGTT
TACGATGCCG AAACAAGAAA AATAACTATT AACTAA
 
Protein sequence
MYPNFKILPE KNKIDLKARI AESIALEKQR ARRKRLRTIS WSAAAVLCLG LGITIVLKQE 
QKEISPIEQF ANNNKTSGSS FEKSNQVQLV LSDKEAVNVS DSTTIAYDAS GNKISVNNKQ
IKQKNSLEPQ YNTVLVPYGK RAQLSLADGT QVWLNSGSKL IYPTTFDGSS REVFLEGEGI
FDVAHNASKP FYVKAANNYS VRVLGTLFNV SCYAKDAKVS TALLRGKVQV SYAKKGLFSS
DTLQTILKPG TIASLDKKRE TIKTTAQNVE PLFSWRKGYY EFSQEKLPLV LDKLTRYYNV
DFVMNKKVSS GETYSGAFKL NDDLDKVVKT LEATTGFEFV YDAETRKITI N