| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3941 |
|---|
| Symbol | |
|---|
| ID | 5089894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4694722 |
|---|
| End bp | 4697538 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644743362 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001196270 |
|---|
| Protein GI | 146301679 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.868589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AGATATTTTT AGCGCACTTT TTAATACTGG GTTTATCTCA GGTTTCAGCG
CAGTTTAAAA CTACAATTCC GCTGCGGAAA GATGTAGTGC ACGGAACTTT AAACAACGGA
ATGCAGTATT TTATTCTGCA TAATGAATGG CCGAAAGAAA GAGCCGACTT TTATTTTGTG
CAGAATGTAG GTGCTATTTT AGAAGATGAC AATCAAAACG GACTGGCGCA TTTTCTGGAA
CACATGGCCT TTAACGGAAC AGAACATTTT AAGGGAAAAG GAATCATTAA TATGCTGGCA
AAACACGGTG TTACTTTCGG ACGTGATATT AATGCCTATA CAGCACACGA CGAAACGGTT
TACAACATTA GCAATGTGCC GGTTAAAAAT CCTGTTTTAT TAGATTCTTG TTTGTATGTT
TTACACGACT GGTCAGGATT TTTGTCTTTA AAAGATGCTG AAATTGATGC CGAAAGAGGC
GTAATTCACG AAGAATGGCG TACCAGAAGA AACGCTGATC TGCGAATAGG ATCGCAGCTG
GAACCTGTTT TATACAACGG TTCAAAATAT GGAAAAAGAG ACGTTTTAGG CGATATGGAT
CTTATTGATC ATTTCAAATA CAAACAACTT AGGGATTATT ATAAAAAATG GTATCTGCCA
AATCATCAGG CGGTAGTAAT TGTGGGCGAT ATCGATCCTG CAAAAATAGA ACAGCAGGTT
AAAAAAATAA TGGGATCAAT TCCAATGCCT TCAAATCCGG CAGAACGTAC TTATGAATCA
ATTCCGGATA ATGATAAACT GCTGTACAAA CTGGCAGTTG ACAAAGAAGC ACAGAAAACC
TCCATTACAT TTAATTTCAA AAAGAACAAA CCGCTTGTTC AGGATTTTAC AGAATTTGGA
AACAGCATTG CAGAACAATT AGCGCTGCAA ATGATGAACA ATCGTTTTAG AGAATATATT
GTAAACAATG AAACCGCTTT ATTATCAGCA GGTGTAAGCC ATTCGAGTTT AACACGTTTA
TCTTCATTAT TTACCTTAAC CGTAAATCCT AAAAACGGCA GATTGTTAGA AGCCTTTCAA
CAAGCTTATA CCGAATATGA AAGAGCAATT CAAAATGGTT TTACAAAAGA AGAACTCGAT
CGTGTAAAAG AAAATATGCG TACTGGTTAT CAAAATCAGT TAAAAAACAA AGATAAAATC
AGTAATGAAA GCTGGGCTTC GCAATTGCAG AATTACTTTT TAGAAGCCTC TCCTGTAATG
AGTCTGGAAG AAGAAGTTGA ATTTGTAAAA TCGACTTTGG ATAAATTGGA TATTAATGAG
GTTAATAAAC TCTTCCGTGC GCTCCCAACA GAGAAAAATC AGATTTTAAC TGTTTCTGGT
CCGGAAAAAG AAAACGTGAC TTATCCAGCT GAAACTGATT ATAAAACTGC AATTAAAAAA
ATAAAAGAAC AAAAATTAGA ACCTTACACC GAAACAATTG CAAACACAGA CTTAGTAACT
GATAAGCTGA CTGCAAAACC AGTTTCTAAG AAATTTGAAA TTAAAGGAAT TGCAGCAGCA
AAAGGATATG TTTTAGCAAA CGGAGCAAAA GTCATTATTT ACCCAACAAC TTTAGCTCAG
GATCAAATTT TGTTTTCAGC TTTTAGTCCC GGCGGGGTTT CTGTACTTCC TGAAAAAGAT
TTGGCATCTT CGCAGATTGC TACAGTTTTA GCCAAAAATT CAGGATTGGG AGATTTTAAA
GTAACCGATC TTCAAAAACA GCTTTCAGGA AAAACCGTAA AAGTAAGCCC GTTTATTGGC
GAACATTACG AAGGTTTCAG CGGAAGTTCA GTAAAAAAAG ATCTGGAAAC GCTTTTAGAA
CTCACTTATT TATACTTTAA AAATCCAAGA TTTGAAACTC AGGCATACAA ACGTATTATT
GATTATTACA ACAATGCACT GGAAAATGTA AACGAAAACA ACAGTAAAAT ATTTGGCGAT
ACAATTGCTT TATTAGATAC CAATCATAAT AAAAGAACTT TTTTGTTAAG CAAAGAAAAC
CTGAATCAGC TAAAGTTTGA TGATGCTTCG AGAATCTATA AAGAGCGCAT TTCTAATGCT
TCAGATTTTA CGTTTGTTTT TGTTGGAAAC ATTGCCGAAA ACGATCTTGA AACCATTAAT
AAATATTTAG GGAATATTTC AGGAAATCAA ACTCAGGAAA AATTTACCGA TCATAAAATA
GGAATGGCAA AAGGATCTGC CAAAGAAAAA CTGGTAAGAG AAATGAGTGT TCCTAAAACC
AGTATTTATG TACATATTGA AAACAGAAGC GTCATTTTTT CTGAAAAAAA CCAAATTATG
GCGTATATGC TTTCGCAGTT GTTAGACAAA CGTTATTTAG ATAAAATCAG AGAAGATGAG
GGCGGAAGTT ACGGTGTACA AACAGAAAGC GCATTGTCTA AAAATCCATC TCCGGTTTTT
TCTCTACGTG TGAGTTTTGA CTGCAATCCG GAAAAAGATG CTAAACTGCT TCAAATTGTG
TATGATGAAT TAGATACCAT CGTAAAAAGT GATGTTTCAC AAAAAGATTT ATCAGATATA
AAGGAAGATT TAATAAAAAG CAATCAGCAG AATATCAAAG CAAATTCATA CTGGATGAAC
ATTATTGTCG ATCAGTTAAA AACAGGAGAC AAGTTTGTAA GCAGTGCCGA ATATGAAAAA
CTAATTAAAA GCATTTCTGT AAAAGACATT AAAAAATATG CAGGCGAAGT ATTGACAAAA
GCAGATAAAG TAGAAGTTGT AATGCAGCCT AAAACAAACG AAAGTACTTT AAAATAG
|
|---|
| Protein sequence | MKAKIFLAHF LILGLSQVSA QFKTTIPLRK DVVHGTLNNG MQYFILHNEW PKERADFYFV
QNVGAILEDD NQNGLAHFLE HMAFNGTEHF KGKGIINMLA KHGVTFGRDI NAYTAHDETV
YNISNVPVKN PVLLDSCLYV LHDWSGFLSL KDAEIDAERG VIHEEWRTRR NADLRIGSQL
EPVLYNGSKY GKRDVLGDMD LIDHFKYKQL RDYYKKWYLP NHQAVVIVGD IDPAKIEQQV
KKIMGSIPMP SNPAERTYES IPDNDKLLYK LAVDKEAQKT SITFNFKKNK PLVQDFTEFG
NSIAEQLALQ MMNNRFREYI VNNETALLSA GVSHSSLTRL SSLFTLTVNP KNGRLLEAFQ
QAYTEYERAI QNGFTKEELD RVKENMRTGY QNQLKNKDKI SNESWASQLQ NYFLEASPVM
SLEEEVEFVK STLDKLDINE VNKLFRALPT EKNQILTVSG PEKENVTYPA ETDYKTAIKK
IKEQKLEPYT ETIANTDLVT DKLTAKPVSK KFEIKGIAAA KGYVLANGAK VIIYPTTLAQ
DQILFSAFSP GGVSVLPEKD LASSQIATVL AKNSGLGDFK VTDLQKQLSG KTVKVSPFIG
EHYEGFSGSS VKKDLETLLE LTYLYFKNPR FETQAYKRII DYYNNALENV NENNSKIFGD
TIALLDTNHN KRTFLLSKEN LNQLKFDDAS RIYKERISNA SDFTFVFVGN IAENDLETIN
KYLGNISGNQ TQEKFTDHKI GMAKGSAKEK LVREMSVPKT SIYVHIENRS VIFSEKNQIM
AYMLSQLLDK RYLDKIREDE GGSYGVQTES ALSKNPSPVF SLRVSFDCNP EKDAKLLQIV
YDELDTIVKS DVSQKDLSDI KEDLIKSNQQ NIKANSYWMN IIVDQLKTGD KFVSSAEYEK
LIKSISVKDI KKYAGEVLTK ADKVEVVMQP KTNESTLK
|
|---|
| |