Gene Fjoh_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3939 
Symbol 
ID5089892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4693024 
End bp4693791 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content33% 
IMG OID644743360 
Producttrans-aconitate 2-methyltransferase 
Protein accessionYP_001196268 
Protein GI146301677 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTGGA ATCCAGAAAT ATACAATACA TTTAAAGACA TTCGTTATAA ACCATTTTAT 
GATTTGGCTG ATTTGATAAA GCCAGTCAAA AATAAGAAAG CCATTGATTT AGGATGCGGT
ACAGGCGAAC AAACCGCTAT TTTAGCAGAT AAATTTAAAG AAGTCCATTT TCTTGGTGTT
GATTCTTCGG CAGAAATGCT CGAAAAATCA AAAGCATTAG AAACAGAAAA CCTGCATTTT
CGCAGAGCAT CAACCGAAGA AATGATTGAA AATGCCGAAA AATGGGATTT AATTTTTAGC
AATGCCGCTT TGCAATGGTC GAATAATCAT GAAATTTTGT TTCCTAAATT GATACACCTT
CTTAATTCAA AAGGGCAGTT TGCAGTTCAA ATGCCGATGC AACCAGAAAA TAAACTCAAC
AAAATTTTAA TCGAATTGGT TAACGAAGAA CCTTTTAAAA CGTATCTAAA AGGCTTTAAA
AGAGATTCAC CCGTTTTGAG TATTGATGAA TATGCGCAGA TACTATTTGA CAGCGGACTC
GAAGATATTC AAATCATGCA GAAAGTGTAT CCCATAATTG CAAACGATCA CGATACGTTG
TATAATTTCA TTTCAGGTTC AGCTTTAATT CCATACATGG AAAAACTTGA AGGCGGACAG
AAAGAACTTT TTATAAAAAC ATACAAAGAA AGAATAGCAG AAAGTTTTCC TAAACTTCCG
GCAATTTATT CTTTTAAAAG ACTTTTGCTT TACGGAACAA AAGCATAA
 
Protein sequence
MPWNPEIYNT FKDIRYKPFY DLADLIKPVK NKKAIDLGCG TGEQTAILAD KFKEVHFLGV 
DSSAEMLEKS KALETENLHF RRASTEEMIE NAEKWDLIFS NAALQWSNNH EILFPKLIHL
LNSKGQFAVQ MPMQPENKLN KILIELVNEE PFKTYLKGFK RDSPVLSIDE YAQILFDSGL
EDIQIMQKVY PIIANDHDTL YNFISGSALI PYMEKLEGGQ KELFIKTYKE RIAESFPKLP
AIYSFKRLLL YGTKA