Gene Fjoh_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3938 
Symbol 
ID5090168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4692358 
End bp4692996 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content34% 
IMG OID644743359 
Producthypothetical protein 
Protein accessionYP_001196267 
Protein GI146301676 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT TAGTAATTGG GGCGACAGGC TCAACAGGAA AGTTTTTAAC AGAAGAGCTT 
CTTAATGATA ACGATTATAC TTCGGTTGTA ACTTTTGTTA GAAAACCTTC CGGGAAAACG
CATCTTAAAT TAACAGAACA TATTGTCGAT TTTGAAAACG TTGGGCATCT TAAAAATTTA
ATTACAGGCG ATGTTTTGTT TTCCTGCCTC GGAACGACTT TAAAAGATGC GGGCTCAAAA
GAAAAACAAT GGAAAATAGA TTTTGATATT CCCGCTGCAT TTGCTGCAGA AGCACAAAAA
AATCAGGTAA AATCGCTTGT TTTGGTTTCT TCTTATGGTG CATCGGCTCA AAGCAGTGTT
TTTTATTCTA AGATGAAAGG AAAACTCGAA GATTATATTG CTGCTCTTAA TTTTGAGCAG
TACATTATTT TTAGACCTGG ACCATTAGTA CGACAAGATT CTGATCGATT GGGCGAAAAA
ATAACCGTAA AAGTTATAGG AATACTCAAC AAAATTGGAC TTTTTAAAAA ATTCAAGCCG
CTTGAAACTT CACTTCTGGC CAAAAAATTA GTGAAAGCTC CAAAAATACT TTCCTCTGGA
ACTACGATAG TTGAGCTCAA TAAAATTTTT GAATTTTAA
 
Protein sequence
MKALVIGATG STGKFLTEEL LNDNDYTSVV TFVRKPSGKT HLKLTEHIVD FENVGHLKNL 
ITGDVLFSCL GTTLKDAGSK EKQWKIDFDI PAAFAAEAQK NQVKSLVLVS SYGASAQSSV
FYSKMKGKLE DYIAALNFEQ YIIFRPGPLV RQDSDRLGEK ITVKVIGILN KIGLFKKFKP
LETSLLAKKL VKAPKILSSG TTIVELNKIF EF