Gene Fjoh_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3936 
Symbol 
ID5090166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4689339 
End bp4691612 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content35% 
IMG OID644743357 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001196265 
Protein GI146301674 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA AAGATATAGT CAATCGCGAT CTTGTTACCT TAACCAATTG TGAACACGAA 
CCCATACATA TCCCGGGAAG TATCCAGCCT CACGGTTTTT TGATAGGTCT TGATTCTGAT
TTGAAAATAG ATTTCTGCAC AGCAAATATT TCTTTATTTG TCGATTTACA GCATACCGAT
ATTTTAGGGA AAAATTTTAC AGCTATTTTT GGTTCAAAAC AGCAAAAACA AATTCTTGAT
TATATCAATG AAGATAAAAT TCAGAATGTA TTTCCTTTAG AAATTAATTT ATTAGGAAAG
TCATTTCAGG TCAGCATACA TAAAAGTTAT GATATTTATG TGCTGGAAGC AGAACTCAAA
TTTGCCGACA GAGAAAAACT GGCCGATGTT TACACACAAA CGATTCAGTT TGTGACCCAA
ATGAATAATA CAACTTCGCT TAAAGACTTG TGCGCGCTGG TTGCAGAAGG AACACGGGAA
ATTACAGGTT ATGACCGTGT AATGATCTAT AAGTTTGACG AGCTGTATAA TGGTGAAGTA
TTTGCCGAAA GCTGCCGTGA AGATCTTGAA CCATTTTTGG GGCTGCATTA TCCGCATACT
GATATTCCGG TTCAGGCCAG AGAATTGTAT ATCAAAAATC AGCTTCGATT AATTGTAGAT
ATTAATTATA AACCCGTTCC AATATTTACG ATTGATGATA ATAAAGAAAA TAAAAATCTC
GATTTAAGCC TTTCTATATT AAGAAGTACG TCTCCAATTC ACGTAGAATA TTTAAAAAAT
ATGGGAGTTG GCGCAACACT TACCATTTCG CTTATTCATC ACGACAGACT TTGGGGATTA
ATTGCCTGTC ATCATTATTC TAAAAAGAAT ATTTCGCCGG AAATTAGACT GGCAGCAAAA
CTTCAGGGAC AGTTTATAAC TTCTCAAATT GATATCAGGC AATCAAATGA TGAGAATGTA
AGCGCGCAAA GAGCATCTTT AGCTCTTGAA GAATTAACGA GTTTAGAACT GCCGCTTTCA
GATGACTCAT TAGAAACGAT TGTCAATACT CAGGAAATTT TAAATTTATG CAATGCCTCT
GGTGTATCTG TTTCAACAAA GGATAAAATT TATAAAAGTA CTTTAGCACC TTCTGATGAT
TATATCAGAA CCTTAACAGA GCAGATTACC AAACAAATAC AGGATAAAAC TTTTGTTACC
AATAAGCTGA GCGATTATTT TTCTGAAATA GAACGCTGTC CTGATTTTGC AGGTATTTTG
TATCATTCTC TAGACAGTCA CAGCCATATT ATTTGGTACA GACCCGAAAC AATATCTGAA
ATTAATTGGG GAGGAGATCC GGAAAAAGCG ATTGTAAAAG ACAATAACGG ACTGCATCCT
CGAAATTCAT TTAATATTTG GAAACAGATT ATAAAAAACC AGAGCAATAC CTGGAAACAA
TATGAAATAA ACACGGCAAT ACGCTATTCG CATACGCTTC ACAATCATTT AATGCTGATA
ATGCTCAGCA AGGAAGAAGA AAAATATCGT ACGCAGAGTG AGGTATTGAA AGAAACCAAT
TCAGAACTTG AAAACATCAA CTGGATTAGT ACACACGATT TACAGGAACC CCTGCGTAAA
ATTCAGATGA TTACTTCAAA AATGCTTACT GAACTTGATG TTATTCCTCT GGAATCTATT
CACAGCTCAT TAGTAAGAGT ATCAAAATCA GCAGGCAGAA TGAGAATTCT GCTCGAAGAC
ATTTTAAAAT TTACCAGAAT AAAAAACACC AGAGATGTAC TGCAAAAAGT AGATTTAAAT
CAAATTTTAA AAACTACAAC GGCAGAAATG AAAGAAAACA TCAAAGAAAG CAAAGCGGTA
ATACAAAGCG AAAACCTTCC GGAAGTTTAT GCCGTAAGTT TTTTAATGAG ACAGCTGTTT
TCAAACCTCA TTCAAAATTC GCTAAAATAT GCATCGCCGG ACAGATCTCC GGTTATTAAA
ATCACAGCTT CTCAGGAACC TGAGCTGTTT GGGCATTTAA ACAAAATTTA CTGCCATTGG
GTTAATTTTT CAGATAACGG GATTGGTTTT GAACAACAAT ATGCCGAAAC GATTTTTAAA
GTTTTCTCCA GACTTCATAA TCAGGATGAA TATACCGGTT CTGGAGTAGG TCTGGCTTTA
TGTAAAAAAA TCATGCAGAC CGTTGGAGGT AATATTGAAG CTGTTGGAAA AGTAGGAGAA
GGGACCGAAA TAAAAATTTA TTTTCCGTGT GACCCGGAAG AAACTCTTTT GTAA
 
Protein sequence
MNIKDIVNRD LVTLTNCEHE PIHIPGSIQP HGFLIGLDSD LKIDFCTANI SLFVDLQHTD 
ILGKNFTAIF GSKQQKQILD YINEDKIQNV FPLEINLLGK SFQVSIHKSY DIYVLEAELK
FADREKLADV YTQTIQFVTQ MNNTTSLKDL CALVAEGTRE ITGYDRVMIY KFDELYNGEV
FAESCREDLE PFLGLHYPHT DIPVQARELY IKNQLRLIVD INYKPVPIFT IDDNKENKNL
DLSLSILRST SPIHVEYLKN MGVGATLTIS LIHHDRLWGL IACHHYSKKN ISPEIRLAAK
LQGQFITSQI DIRQSNDENV SAQRASLALE ELTSLELPLS DDSLETIVNT QEILNLCNAS
GVSVSTKDKI YKSTLAPSDD YIRTLTEQIT KQIQDKTFVT NKLSDYFSEI ERCPDFAGIL
YHSLDSHSHI IWYRPETISE INWGGDPEKA IVKDNNGLHP RNSFNIWKQI IKNQSNTWKQ
YEINTAIRYS HTLHNHLMLI MLSKEEEKYR TQSEVLKETN SELENINWIS THDLQEPLRK
IQMITSKMLT ELDVIPLESI HSSLVRVSKS AGRMRILLED ILKFTRIKNT RDVLQKVDLN
QILKTTTAEM KENIKESKAV IQSENLPEVY AVSFLMRQLF SNLIQNSLKY ASPDRSPVIK
ITASQEPELF GHLNKIYCHW VNFSDNGIGF EQQYAETIFK VFSRLHNQDE YTGSGVGLAL
CKKIMQTVGG NIEAVGKVGE GTEIKIYFPC DPEETLL