Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3918 |
Symbol | |
ID | 5090148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4664153 |
End bp | 4664845 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644743339 |
Product | two component transcriptional regulator |
Protein accession | YP_001196247 |
Protein GI | 146301656 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAG TATTATTAGT AGAAGATGAT CCGCGTGTTG CATCTTTTAT TTTAAGAGGT CTTGAAGAAA ACCTATATCA GGTAAAAACC GTTTCAAAAG GATATGAAGC TGTAAACGAA GTCATGGAAA ATGATTTTGA TATTATCATT CTCGATATTA TGCTTCCTGA TATTACTGGT TTTGAAGTTT GTGAGATTTT AAGAAACAGA AAAATAATCG TTCCCATTCT TATCTTAAGC GCGCTTGATA CACCTCACGA AAAGGTAAAA GGTTTACAAT CCGGCGCAGA TGATTATTTG GCTAAACCTT TTTTGTTTGA AGAACTTTTG GCGAGAATAA ATGCGCAGCT TCGCCGTGCC GAATTCAGCT CCGGAATTTT AGATTTTCAG TCTTATGCGG GAATCGAAAT CAATATGAAA GAACAAAGTG CTTCAAGAGA CGGAAAAGAA CTTAATCTTT CGTCCAGAGA ACTTAAGCTT TTAATTTTCT TTATGAAAAA CCGCGAAAAA GCACTTTCGA GAATTGCAAT TGCAGAAGCT GTCTGGAATC TTGAACTTGA CATGAACTCA AATACGGTTG ATGTTTATAT AAATTACTTA AGAAACAAAG TCGATAAAAA CTTTTCTGAA CCTTTGATCC ATACAGTAAA AGGAACCGGA TATATGCTTA AGAAAAAAAC ACATGAATCT TAA
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Protein sequence | MNKVLLVEDD PRVASFILRG LEENLYQVKT VSKGYEAVNE VMENDFDIII LDIMLPDITG FEVCEILRNR KIIVPILILS ALDTPHEKVK GLQSGADDYL AKPFLFEELL ARINAQLRRA EFSSGILDFQ SYAGIEINMK EQSASRDGKE LNLSSRELKL LIFFMKNREK ALSRIAIAEA VWNLELDMNS NTVDVYINYL RNKVDKNFSE PLIHTVKGTG YMLKKKTHES
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