| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3908 |
|---|
| Symbol | |
|---|
| ID | 5090139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4654777 |
|---|
| End bp | 4655538 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644743330 |
|---|
| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| Protein accession | YP_001196238 |
|---|
| Protein GI | 146301647 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACAA AAACTAACGA TTACAAAAGA GCTTATATCT GGCAGTTACC CGTACGAATT
TTTCATTGGG TAAATGCCTG GGCTATTACA GGACTTGTCG CTACAGGATT TATTATTGGG
AATCCGCCGG GAATCATTTC TACCAAAGAA GCTTCAAACC AATTTTGGTT TGGATACATT
CGGGAGATTC ATTTTATGTG TGCTTACTTA TTGGTTACAG TCATGATTTT GAGAGTTTAT
TTTGCTTTTA AAGGAAATAA ATATGCCAAC TGGCGTGTCT TTTTCCCTTT TAAAAAAGAA
GGTTTTAAAA GAATGTGGCA TGTTATTAAA TATGATATTT TTCTTCAAAA TGAAGAAACA
CACGGCTCTC CAACAGGTGC TGTAGGTCAC AACAGCGTAG CGGCAGCCTC TTATCTCGTT
ATGTTTTTTA TGGCACTCAT CATGATTGCA ACAGGATTTG CCATGTATGC CCCTACTTCG
ACCTGGTTTT TTCCTAAAAT GTTCGGCTGG GTAGTAAACG CGGCTGGAGG AGATTTAAAC
GTCAGAGCGA TACATCATTT TACAACATGG ACTTTTATTT TGTTTGCAAT AGTTCATATT
TATCTGGTTT TCTTTCATGA CTGGCTGGAA GGTTTAGGAG AAACATCGGC AATGGTAAGC
GGTTATAAAT TTGTTCGAAC CGAAAGAGTG AAAAAAGAAG ATGAACTTGT TGAAACTGAA
ATAACAAATC AAAATACAGC ACAGGCAGAA GATTTAAGCT AA
|
|---|
| Protein sequence | MPTKTNDYKR AYIWQLPVRI FHWVNAWAIT GLVATGFIIG NPPGIISTKE ASNQFWFGYI
REIHFMCAYL LVTVMILRVY FAFKGNKYAN WRVFFPFKKE GFKRMWHVIK YDIFLQNEET
HGSPTGAVGH NSVAAASYLV MFFMALIMIA TGFAMYAPTS TWFFPKMFGW VVNAAGGDLN
VRAIHHFTTW TFILFAIVHI YLVFFHDWLE GLGETSAMVS GYKFVRTERV KKEDELVETE
ITNQNTAQAE DLS
|
|---|
| |