| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3906 |
|---|
| Symbol | |
|---|
| ID | 5090137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4651881 |
|---|
| End bp | 4653008 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644743328 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_001196236 |
|---|
| Protein GI | 146301645 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATG AAATAAAAGT AAATGAAACC TATTATAACA GCATTGAAAG ACAAGGTTAT
AGCAGGAGAG ATTTTTTAAA ATTTGTTGCT TACATCGGCG CCTATATGGG CGTGCAGAGT
TCTGCAATTG GTCAGATTAC CAAAGCGCTC GAAAACACCC CCCGTCTCCC GGTAATCTGG
GAACATTTTC AGGAATGCAC CTGCTGCAGT GAGTCTTTCA TACGATCAGA CCATCCTATT
GTTGCCGATA TTATTTTAGA CAAAATCTCT TTAGATTACA CTTTAACACT TATGGCCGCT
TCTGGTCATC AGGCCGAAGC TGCGAAAAAA GCAACTATGG ACAAATACAA AGGAGAATAC
ATTCTTTGTG TTGAAGGTTC TGTACCTATG GGAGCTGACG GAAATTACTG CTGTATAGGC
GGAAGAAGTG CTATTGATAT TCTAAAAGAA TCTGCTGCAG GAGCAAAAGC TATTATTGCC
TGGGGAAGCT GTGCAACAAC AGGCTGTGTG CAGGCTGCAA AACCAAATCC TACAGGAGCT
GTTCCTATCA ATAAAATTAT TACCGATAAA CCTATTATAA ATGTTCCGGG CTGTCCGCCA
ATTGGTGAAG TTATGGCCGG AATTATTGTA CACGTTGTCG CATTTGGAAA ACTGCCTGAA
TTAGACAGTT CTGGTCGTCC AAAAGCTTTT TATTCTAAAA GAGTTCACGA CAGCTGTTAT
CGCAGACCTT ATTTTGATGC AGGATTATTT GCTGAAAACT TTGATGACGA AAATGCTAAA
AAAGGATACT GCCTATACAA AGTGGGCTGT AAAGGGCCAA GTACTTACAA TGCATGCGGT
AATATGAAAT GGAACGGCGG TGTGAGTTAT CCTATTCAAT CCGGACATGG ATGTATTGGC
TGCAGTGCCA AAGATTTTTG GGATGCTGGA AGCTTTTACT CAAGAGATAC TTCTATAAAT
GCAGGAAGCA TCGAGGCCAA CGCCGATTTA CTGGGCAAAG TTGCTCTTGG TGGTGTTGCC
GCAGGAATTG GAGCTCACGC GATTCTTTCG AATGTATCTA AAAGAAAAGA ATTAAATCAG
AGAATTAGTC AGGGAACTGA AAACGAAAAA CACTTAGAGG ATTTATAA
|
|---|
| Protein sequence | MKDEIKVNET YYNSIERQGY SRRDFLKFVA YIGAYMGVQS SAIGQITKAL ENTPRLPVIW
EHFQECTCCS ESFIRSDHPI VADIILDKIS LDYTLTLMAA SGHQAEAAKK ATMDKYKGEY
ILCVEGSVPM GADGNYCCIG GRSAIDILKE SAAGAKAIIA WGSCATTGCV QAAKPNPTGA
VPINKIITDK PIINVPGCPP IGEVMAGIIV HVVAFGKLPE LDSSGRPKAF YSKRVHDSCY
RRPYFDAGLF AENFDDENAK KGYCLYKVGC KGPSTYNACG NMKWNGGVSY PIQSGHGCIG
CSAKDFWDAG SFYSRDTSIN AGSIEANADL LGKVALGGVA AGIGAHAILS NVSKRKELNQ
RISQGTENEK HLEDL
|
|---|
| |