Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3883 |
Symbol | |
ID | 5090114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4628317 |
End bp | 4630944 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743305 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_001196213 |
Protein GI | 146301622 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.128454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGA AAAAAACGAT ATACTGCCTC ATATTTTTAA TTTGCTTTTA TTCCTATTCA CAAGACAAAA AGTATGATTT TCAATTTCAA AATCCGTCAC TGAGTTTTGA ACAGAGAGTT GATGATCTTG TGAGTCGTTT AACATTAGAA GAAAAAGTTT CTCAAATGCT AAATTCGTCA CCTGAAATTG CAAGATTAGG TATTCCTGCT TATGACTGGT GGAACGAAAC TTTGCATGGA GTTGCGAGAA CTCCATTTAA AACAACGGTT TATCCTCAAG CTATTGGAAT GGCGGCAACT TTCGATAAAA ATTCACTCTT TACAATGGCC GACTACTCAG CTCTTGAAGG CAGGGCCATA TACAATAAAG CGGTTGAACT TAAAAGAACC AACGAACGTT ATTTGGGACT CACCTACTGG ACTCCAAATA TCAATATTTT TCGTGATCCT CGCTGGGGAC GCGGACAGGA AACCTATGGA GAAGATCCTT ACTTAACAGC TGTCTTAGGT GATGCTTTTG TAAAAGGCCT ACAGGGAGAT GATCCTAAAT ACCTAAAAGC GGCCGCTTGT GCTAAACATT ATGCTGTTCA CAGCGGTCCG GAATCGCTAA GACATACTTT TGATGTTGAT GTAACGCCTT ATGAACTTTG GGACACTTAT CTTCCTGCTT TTAGAAAATT AATAACCGAA TCGAATGTAG CCGGTGTTAT GTGTGCTTAC AATGCATTTA GAACACAGCC TTGTTGTGCA AGTGACATTT TAATGAATGA TATTCTGAGA AAAGAATGGA AATTTGACGG TTATGTTACT TCAGACTGCT GGGCGATTGA CGATTTTTTT AAGAATCATA AAACACATCC CGATGCTGAA TCTGCTGCTG CCGATGCCGT TTTTCATGGC ACTGATATTG ATTGCGGCAC CGATGCTTAT AAAGCACTTG TTCAGGCTGT TAAAAATGGA AAAATCAGCG AAAAACAGAT TGATATTTCT GTAAAACGTC TTTTTATGAT TCGTTTCAGA CTTGGAATGT TTGATCCAGT ATCAATGGTC AAATATGCCC AAACCCCATC TTCTGTTTTA GAAAGCAAAG AACATCAGTT ACATGCCTTA AAAATGGCAA GACAGTCGAT CGTTTTACTT AAAAATGAAA AAAATATTCT TCCTTTAAAT AAGAACCTAA AAAAGATTGT GGTTCTGGGA CCAAACGCCG ACAATGCTAT TTCAATATTG GGAAATTATA ACGGAACTCC GTCTAAACTG ACTACAGTTT TGCAGGGTAT TAAAGAGAAA GTGAGTCCTG ATACAGAAGT TATTTATGAG AAAGCAGTTA ACTTTACAAA TGATACTTTA CTGGTTTACA AAGACTTGAA GAATCAATAC TCATACGAAG GCAAACAAGG TTTCAAAGCT GAATATTACA ATAATACTAC TCTTTCAGGA CAGCCTGAAG CGGTTAGAAG CGAATCAGAA ATCAATAATT TCTGGCAGGA AGGAGAAGTT GTAATTCAAA ACATCAAAGC AAATCATTTC TCTGCGCGTT ATACTACAAA CTTTACAGCA GATCAGGACG GTTCTGTTAC TTTTGAACTT AAAGCCGATG ACGGTTATCG TTTTATAATA AACGGAAAAG AAGTTGTAAA TGCCTGGCAG AAGAATAGAT GGGGAGAAAA AACTTTTAAA CTTGAAACCA AAAAAAATAC AGTTTATAAA ATAGTATTGG AATATTGGCA GGGAGAAGGA AAAGCAGAAG TATCGCTGCA GACCGGAAAT TTTGTAAAAA CCAATTTTGC AGATTTAATT GAACATCATA AAAATGCTGA CGCTTTTATT TTTGCCGGCG GTATTTCGCC ACAGCTGGAA GGAGAAGAAA TGCCTGTCGA TTTTCCCGGA TTTAAAGGAG GTGACCGCAC CTCTATCCTG TTTCCGGAGG TGCAGACCAA ACTTTTAAAA GCGCTTCAGT CTTCTGGAAA ACCAGTAGTT TTTGCCATGA TGACGGGAAG CGCAATAGCC ATTCCGTGGG AAGCAGAAAA TATTCCGGCA ATATTAAATA TCTGGTACGG CGGACAATCG GCAGGAACCG CAGCAGCCGA TGTAATTTTT GGAGATTATA ACCCGGCAGG AAGACTTCCT GTTACTTTTT ACAAAAACGA TTCAGATTTA CCTTCTTTTG TAGATTATAA AATGGATAAT AAAACGTATC GTTATTTTAA AGGAACGCCG CTATACGGCT TTGGATACGG ACTGAGTTAT ACTTCATTTA AATACAGTGA TTTAAAAACA CCAGTTAAAA TTAAAAAAGG ACAGTCAGTT TCTATTTTGG TTAAAGTAGC AAATACCGGA AAAACAGAAG GCGAAGAAGT GGCGCAGCTG TACTTAATTA ATCAGGATAC AGCAATAAAA ACACCTTTGA AAAGTTTAAA AGGATTTGAA CGATTCAATT TAAAACCTGG TGAAAATAAA ACAATTACTT TTAATCTTTC TCCTGAAGAT CTTTCGTATG TTACACCAGA AGGCAGTTTA AAGCAATATG AAGGCAAAAT CAAAATTTCA ATTGGAGGAA GTCAGCCAGA TGAAAAACTG CTGACAAAAA GCAATGTTGT TTCTAAAATT ATGCAATTAG AAAACTAA
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Protein sequence | MKMKKTIYCL IFLICFYSYS QDKKYDFQFQ NPSLSFEQRV DDLVSRLTLE EKVSQMLNSS PEIARLGIPA YDWWNETLHG VARTPFKTTV YPQAIGMAAT FDKNSLFTMA DYSALEGRAI YNKAVELKRT NERYLGLTYW TPNINIFRDP RWGRGQETYG EDPYLTAVLG DAFVKGLQGD DPKYLKAAAC AKHYAVHSGP ESLRHTFDVD VTPYELWDTY LPAFRKLITE SNVAGVMCAY NAFRTQPCCA SDILMNDILR KEWKFDGYVT SDCWAIDDFF KNHKTHPDAE SAAADAVFHG TDIDCGTDAY KALVQAVKNG KISEKQIDIS VKRLFMIRFR LGMFDPVSMV KYAQTPSSVL ESKEHQLHAL KMARQSIVLL KNEKNILPLN KNLKKIVVLG PNADNAISIL GNYNGTPSKL TTVLQGIKEK VSPDTEVIYE KAVNFTNDTL LVYKDLKNQY SYEGKQGFKA EYYNNTTLSG QPEAVRSESE INNFWQEGEV VIQNIKANHF SARYTTNFTA DQDGSVTFEL KADDGYRFII NGKEVVNAWQ KNRWGEKTFK LETKKNTVYK IVLEYWQGEG KAEVSLQTGN FVKTNFADLI EHHKNADAFI FAGGISPQLE GEEMPVDFPG FKGGDRTSIL FPEVQTKLLK ALQSSGKPVV FAMMTGSAIA IPWEAENIPA ILNIWYGGQS AGTAAADVIF GDYNPAGRLP VTFYKNDSDL PSFVDYKMDN KTYRYFKGTP LYGFGYGLSY TSFKYSDLKT PVKIKKGQSV SILVKVANTG KTEGEEVAQL YLINQDTAIK TPLKSLKGFE RFNLKPGENK TITFNLSPED LSYVTPEGSL KQYEGKIKIS IGGSQPDEKL LTKSNVVSKI MQLEN
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