| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3880 |
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| Symbol | |
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| ID | 5093791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4620521 |
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| End bp | 4622236 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644743302 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196210 |
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| Protein GI | 146301619 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG GAAATATCTT TTTTTTACTG GCAGCAGCAC TTCTGTGTTC TTATACAGGA
ACTGCTCAGA AAAAAATGCA ATCAAAAAAA ACAGCTGTTT TTTCTAATGT CGTTTACAAT
GGTGATGATC AGATTTATAA AAATAATCCA TTAAAACCAG ACGAATTTTA TACGCCTATT
TTACAGGGAT GTTATCCAGA TCCTGCCATT ACCAAAAAAG GAGATGATTA CTACATGGTA
TGTTCTTCAT TTGCAATGTT TCCCGGCGTG CCTATTTTTC ATTCCAAAGA TTTAGTAAAC
TGGACAGATT TGGGAGGTGT TTTAAACAAT GTATCCGAAT TTAATCCGCA TGATACCGGA
ATCAGCGCAG GAGTATATGC ACCCGGAATT ACCTACAATC CGCACAATGA TACTTTTTAT
ATGATTGTGA CAGCCTTTTC AGGTGGCCTT GGAAATATCA TTGTCAAAAC AAAAGATCCC
ATGAAAGGAT GGGGAAGCCC TATAAAATTA GACTTCGGCG GTATTGATCC TTCAATCTTT
TTTGATGAAA ATGGCAAAGG ATATATCGTT CATAATGACG CACCCGATAA AGGAAAAGAA
TTATACGAAG GACACCGTGT AATTAAAGTT TGGGAATATG ATCTTACTAC TGATAAAGTA
ATTCCCGGCA CCGATAAAAT TATTGTAGAC GGAGGAGTAG ACCTTTCTAA AAAACCTATT
TGGATTGAAG CACCGCATTT ATATAAAAAA AATGGGAAAT ATTATTTAAT GTGTGCCGAA
GGCGGTACAG GAGGAAATCA CAGCGAAGTT ATTTTCACCA GTGATAGTCC AAAAGGCCCT
TTTAAACCAG CATCAAATAA CCCGATTCTT ACCCAGCGTT ATTTTCCAAA AGACAGAGCC
AATAAAGTAG ACTGGGCAGG CCACGCTGAT TTAATACAAG GACCGGACAA TAAATATTAC
GGTGTTTTCC TGGCAATCCG ACCTAACGAA AAAGACAGAG TAAATATAGG AAGAGAAACT
TTTATACTTC CTGTAGACTG GTCTGGCGAA TTTCCTGTTT TTGAAAACGG ATTAGTTCCT
ATGCAGCCAA AACTAAAAAT GCCGGCTGGA GTTACAAACC AAACCGGAAA AAATGGGTTT
TTTCCAAATG GAAATTTCAC TTTTACCGAA AATTTCACTT CTCAAAAATT AGATTACAGA
TGGATAGGAT TAAGAGGTCC TCGCGAAAAC TTTAGTTCAG TAAGTAAAAA AGGTTTAGAA
ATAACGCCTT TTGAAGTAAA CATTAAAGAA ATGAAACCTA CTTCGACACT TTTTTACAGA
CAACAGCACA ATACTTTCTC ATTTACAGCA TCAGTTGATT ACAAACTGCA GTCAGAAAAA
GATCTGGCAG GAATTGTATG TCTTCAAAAT GAACGTTTTA ATTATGTTTT CGGGATTACT
AAAAAAGGAA ATGATACTTT TATAATACTG GAAAGAACAG AAAAAGGACA GTCAAAAATT
ATAGCAAGTT CTAAAATCAA AATAACAAAT ACACTTCGTC TGCAGGTAAA AGCTGCGGGA
GACAATTATG AATTCAGTTA TGCTGTAAAT GGAGTTGATT TTGAAAATTT AGGCGGAACC
GTTTCTGGCG ATATTCTTTC AACAAATGCT GCCGGAGGTT TTACAGGGGC ATTAGTAGGT
TTATATGCTA CTTCGGCTAA TGATGCTCAT CCATAA
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| Protein sequence | MIKGNIFFLL AAALLCSYTG TAQKKMQSKK TAVFSNVVYN GDDQIYKNNP LKPDEFYTPI
LQGCYPDPAI TKKGDDYYMV CSSFAMFPGV PIFHSKDLVN WTDLGGVLNN VSEFNPHDTG
ISAGVYAPGI TYNPHNDTFY MIVTAFSGGL GNIIVKTKDP MKGWGSPIKL DFGGIDPSIF
FDENGKGYIV HNDAPDKGKE LYEGHRVIKV WEYDLTTDKV IPGTDKIIVD GGVDLSKKPI
WIEAPHLYKK NGKYYLMCAE GGTGGNHSEV IFTSDSPKGP FKPASNNPIL TQRYFPKDRA
NKVDWAGHAD LIQGPDNKYY GVFLAIRPNE KDRVNIGRET FILPVDWSGE FPVFENGLVP
MQPKLKMPAG VTNQTGKNGF FPNGNFTFTE NFTSQKLDYR WIGLRGPREN FSSVSKKGLE
ITPFEVNIKE MKPTSTLFYR QQHNTFSFTA SVDYKLQSEK DLAGIVCLQN ERFNYVFGIT
KKGNDTFIIL ERTEKGQSKI IASSKIKITN TLRLQVKAAG DNYEFSYAVN GVDFENLGGT
VSGDILSTNA AGGFTGALVG LYATSANDAH P
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