Gene Fjoh_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3879 
Symbol 
ID5093790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4619221 
End bp4620465 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content38% 
IMG OID644743301 
ProductGDSL family lipase 
Protein accessionYP_001196209 
Protein GI146301618 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA AAATAAAGTC TGTTAAATGG ATCGTACTTT TAAATCTGCT GTTTGTAATG 
GCAGGGTGTA CATCGAATAA AGCATTAATT AAAACGGGAG ATAAAAAAGA AGATCAAAAC
TGGACAGGCA CCTGGGCAAC AGCTCAAATG CTTGTTGAAC CAAAAAATAT GCCTCCTGAA
CCCGGATTAG CACAGAATAC ACTTCGTCAG ATTATTAAAG TATCGCTGGG CGGTAAACAG
ATTAGACTTC GTTTTTCTAA TCTGTTTAGC GATCAGCCTG CCGTTCTGAA ATCGGTAAGT
GTTGCCAATG TTACAGAAGC TCCGGCTGTA GATATAAAAA CACAAAAAAT ATTGAGTTTT
AAGGGCAGTC CGCAAGTAAC ACTGGGAGCT GATGAGGTAG TATATTCAGA TGCTTTTGAT
TTTGAATTAC AGCCAGGACA GCTTTTAGCC ATTACCATTC ATTATGGCGA AATTTCATCA
AACGTATCAG GTCATCCCGG TTCCCGCACA ACTTCTTATA TTTTACAAGG CGATCATATC
AATAACGAAT CTTTTGCAGG AGCAGTAAAA ACAGACCATT GGTATTCTAT TATGGGAGTC
GACATTAGTT CAGTTAAAAA TGAGAGTAAT GTTGTATGCT TAGGAAATTC AATTATCGAC
GGCCGCGGAT CTGGAACAAA CAAACAAAAC CGCTGGACAG ATATTTTAGC ATCACGTCTA
AATGCGAATA AAAACACAGC CCATATTGGT GTGCTTAATT TAGGAATTGG AGGGAATTGT
GTAGTAAGGG GAGGATTAGG ACCAACGGCC TTAAATCGTT TTGACAGAGA TGTACTTTCT
CAAAGCGGGA CCAAATGGCT TATTATTCTG GAAGGAATAA ATGACATTGG CGGCATTCGA
AAAGCAGAAG ATGCATCAGT CACAGCAAAA GAAATTATAG AAGGCTATAA AGTTATGATT
GATAAAGCCC ATGCCAAAGG TATAAAAGTA TTTGGCGGTA CAATTCTGCC ATTTGAAAAA
TCCTTTTATG ATGCGCCTTT TAAACAAGAT GCACGAGATA TTGTAAACGA ATGGATTAGA
ACCAAAGGCA ATTTTGATGC TGTAATTGAT TTTGATAAAG CAATGGCTTC AGACGTTGGC
TCTAAAACAA TTTTGCCAGA TATGCACGAC AACGATTTTT TACATCCCAA TGAAAAAGGA
TATCAAAGAA TGGGAGAAAC CGTTGATTTA GATTTGTTTC AATAA
 
Protein sequence
MNVKIKSVKW IVLLNLLFVM AGCTSNKALI KTGDKKEDQN WTGTWATAQM LVEPKNMPPE 
PGLAQNTLRQ IIKVSLGGKQ IRLRFSNLFS DQPAVLKSVS VANVTEAPAV DIKTQKILSF
KGSPQVTLGA DEVVYSDAFD FELQPGQLLA ITIHYGEISS NVSGHPGSRT TSYILQGDHI
NNESFAGAVK TDHWYSIMGV DISSVKNESN VVCLGNSIID GRGSGTNKQN RWTDILASRL
NANKNTAHIG VLNLGIGGNC VVRGGLGPTA LNRFDRDVLS QSGTKWLIIL EGINDIGGIR
KAEDASVTAK EIIEGYKVMI DKAHAKGIKV FGGTILPFEK SFYDAPFKQD ARDIVNEWIR
TKGNFDAVID FDKAMASDVG SKTILPDMHD NDFLHPNEKG YQRMGETVDL DLFQ