Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3879 |
Symbol | |
ID | 5093790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4619221 |
End bp | 4620465 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644743301 |
Product | GDSL family lipase |
Protein accession | YP_001196209 |
Protein GI | 146301618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTAA AAATAAAGTC TGTTAAATGG ATCGTACTTT TAAATCTGCT GTTTGTAATG GCAGGGTGTA CATCGAATAA AGCATTAATT AAAACGGGAG ATAAAAAAGA AGATCAAAAC TGGACAGGCA CCTGGGCAAC AGCTCAAATG CTTGTTGAAC CAAAAAATAT GCCTCCTGAA CCCGGATTAG CACAGAATAC ACTTCGTCAG ATTATTAAAG TATCGCTGGG CGGTAAACAG ATTAGACTTC GTTTTTCTAA TCTGTTTAGC GATCAGCCTG CCGTTCTGAA ATCGGTAAGT GTTGCCAATG TTACAGAAGC TCCGGCTGTA GATATAAAAA CACAAAAAAT ATTGAGTTTT AAGGGCAGTC CGCAAGTAAC ACTGGGAGCT GATGAGGTAG TATATTCAGA TGCTTTTGAT TTTGAATTAC AGCCAGGACA GCTTTTAGCC ATTACCATTC ATTATGGCGA AATTTCATCA AACGTATCAG GTCATCCCGG TTCCCGCACA ACTTCTTATA TTTTACAAGG CGATCATATC AATAACGAAT CTTTTGCAGG AGCAGTAAAA ACAGACCATT GGTATTCTAT TATGGGAGTC GACATTAGTT CAGTTAAAAA TGAGAGTAAT GTTGTATGCT TAGGAAATTC AATTATCGAC GGCCGCGGAT CTGGAACAAA CAAACAAAAC CGCTGGACAG ATATTTTAGC ATCACGTCTA AATGCGAATA AAAACACAGC CCATATTGGT GTGCTTAATT TAGGAATTGG AGGGAATTGT GTAGTAAGGG GAGGATTAGG ACCAACGGCC TTAAATCGTT TTGACAGAGA TGTACTTTCT CAAAGCGGGA CCAAATGGCT TATTATTCTG GAAGGAATAA ATGACATTGG CGGCATTCGA AAAGCAGAAG ATGCATCAGT CACAGCAAAA GAAATTATAG AAGGCTATAA AGTTATGATT GATAAAGCCC ATGCCAAAGG TATAAAAGTA TTTGGCGGTA CAATTCTGCC ATTTGAAAAA TCCTTTTATG ATGCGCCTTT TAAACAAGAT GCACGAGATA TTGTAAACGA ATGGATTAGA ACCAAAGGCA ATTTTGATGC TGTAATTGAT TTTGATAAAG CAATGGCTTC AGACGTTGGC TCTAAAACAA TTTTGCCAGA TATGCACGAC AACGATTTTT TACATCCCAA TGAAAAAGGA TATCAAAGAA TGGGAGAAAC CGTTGATTTA GATTTGTTTC AATAA
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Protein sequence | MNVKIKSVKW IVLLNLLFVM AGCTSNKALI KTGDKKEDQN WTGTWATAQM LVEPKNMPPE PGLAQNTLRQ IIKVSLGGKQ IRLRFSNLFS DQPAVLKSVS VANVTEAPAV DIKTQKILSF KGSPQVTLGA DEVVYSDAFD FELQPGQLLA ITIHYGEISS NVSGHPGSRT TSYILQGDHI NNESFAGAVK TDHWYSIMGV DISSVKNESN VVCLGNSIID GRGSGTNKQN RWTDILASRL NANKNTAHIG VLNLGIGGNC VVRGGLGPTA LNRFDRDVLS QSGTKWLIIL EGINDIGGIR KAEDASVTAK EIIEGYKVMI DKAHAKGIKV FGGTILPFEK SFYDAPFKQD ARDIVNEWIR TKGNFDAVID FDKAMASDVG SKTILPDMHD NDFLHPNEKG YQRMGETVDL DLFQ
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