| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3875 |
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| Symbol | |
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| ID | 5093786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4611034 |
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| End bp | 4612590 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644743297 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001196205 |
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| Protein GI | 146301614 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TCTATAACCT ATTAGCGATT TTTTTAATTC TTACCGGATC TAATGCGCAG
GATAAAAAAG CCCAAAACCC TGTAATTTTT GCAGATGTTC CAGATTTATC CATTATCAGG
ATCGGAAGTA ATTATTATAT GAGCAGTACC ACAATGCACA TGAATCCGGG CGTTCCTATA
ATGAAATCAA AAGATTTAAT TAACTGGAAA ATTATAAACT ATGCGTATGA TACTTTAGGA
AGCAGTGATG AACTAAATCT GGATAATGGC AAAAACACTT ACGGACGAGG TTCATGGGCA
AGTAATATCA GATTTCATAA CAATATGTTT TATGTAACCA CTTTTTCCCA GACTACCGGA
AAGACGTATG TATATACCAC AAAAGATATA GAAAAAGGGC CTTGGAAAGA AATTAGTTTT
AGTCCCGCGT ATCACGATCA CAGTATTTTG TTTGATGACA ATGACAGAGT TTACATGGTA
TATGGAAATG GTAAACTTTT TATTAAAGAA CTACAATCAG ATTTATCAGG AATAAAAGAA
AACGGACTAG ATCAGGTATT GATTGAAAAT GCCAGCAGTC CGGCAGGAAA TAACATTATG
CTGGGAGCAG AAGGTTCTCA ATTGTACAAG ATAAACGGAA AGTATTATCT GTTTAATATT
GTCTGGCCCA AAGACGGAAT GCGTACAGTG CTTATTCACA GAGCCGATAA AATTGCAGGA
CCGTGGGAAG GAAAGATTGG TTTACAGGAT TTAGGTGTTG CACAAGGAGG TTTAATTGAC
ACCCCAGACG GAAAATGGTT TTCGTACTTC TTTAGAGATT ATGGAGGCGT TGGCCGTATT
CCATATTTTG TGCCTGTAAA CTGGGTCGAC GGGTGGCCTG TTTTGGGTGA AAATAATAAA
GTGCCTCAAT ATCTTGATTT ACCCGAAAGT AAAGGATTAA TTCCGGGAAT TGTGAATTCA
GATGATTTCA GCCGAAAAAA AGGAGAAAAA GATCTGTCTT TAGTCTGGCA GTGGAACCAT
AATCCTGATA ATTCGTTATG GTCTGTTCAG GAAAGAAAAG GATACTTACG ATTAAAAACC
GCTTCTATAA CTAACACTTT AACTCAGGCA AAAAATACGC TTACACAAAG AACGTTTGGA
CCAGAATGTT CAGGAACGAC ACTTTTGGAA GTTTCTCAAA TGAAAGATGG TGATTTTGCC
GGACTTACTT TATTTCAAAA AGATTTTGGA CTTGTTGGCG TAAAAGCAGA AAACGGATCA
AAAAGAATTG TCATGATTGA AACAGTAAAC GGCATTTCAA AAGAGATTCA AAGTGTTCCT
TTCTCCGGAA ATAAAATCTA TTTCAAAGCT TCATGCAATT TTAAAGACAA AACAGATTTA
GGACACTTTT ACTACAGCCT TAACGGAAAA GAATGGATAA GCATAGGAAA TGAAATAAAA
CTGCCTTACA CGCTTCCTCA TTTTATGGGC TACAGATTTG GTCTTTTTAA TTATGCAGAG
AAAAGCTTAG GAGGTTATGT CGATTTTGAT TACTTCCATC TTGAGAATAA AAATTAA
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| Protein sequence | MKVLYNLLAI FLILTGSNAQ DKKAQNPVIF ADVPDLSIIR IGSNYYMSST TMHMNPGVPI
MKSKDLINWK IINYAYDTLG SSDELNLDNG KNTYGRGSWA SNIRFHNNMF YVTTFSQTTG
KTYVYTTKDI EKGPWKEISF SPAYHDHSIL FDDNDRVYMV YGNGKLFIKE LQSDLSGIKE
NGLDQVLIEN ASSPAGNNIM LGAEGSQLYK INGKYYLFNI VWPKDGMRTV LIHRADKIAG
PWEGKIGLQD LGVAQGGLID TPDGKWFSYF FRDYGGVGRI PYFVPVNWVD GWPVLGENNK
VPQYLDLPES KGLIPGIVNS DDFSRKKGEK DLSLVWQWNH NPDNSLWSVQ ERKGYLRLKT
ASITNTLTQA KNTLTQRTFG PECSGTTLLE VSQMKDGDFA GLTLFQKDFG LVGVKAENGS
KRIVMIETVN GISKEIQSVP FSGNKIYFKA SCNFKDKTDL GHFYYSLNGK EWISIGNEIK
LPYTLPHFMG YRFGLFNYAE KSLGGYVDFD YFHLENKN
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