| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3866 |
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| Symbol | |
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| ID | 5093777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 4590617 |
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| End bp | 4592008 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644743288 |
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| Product | endo-1,4-beta-xylanase |
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| Protein accession | YP_001196196 |
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| Protein GI | 146301605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0285247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA AATTTTTATT AATGCTGATA AGCGTCGTCT TTTTTCTAAA TGCGTGTTCA
AAAGACGATA ACGACGCTGC TGAAATTCTG GAAACACCAG TTGCCAACGC TCCAAAAGAT
GTAAATGATA ACGGTTTTAA AGCAAAATGG AATTATGTTT CCCATTCAAA AAGTTATCTT
TTGGATGTTT CAACCAGCGA AGATTTTACC ACTATTCTTC CTAATTACAA TTCAAAAGAA
GTTACTGATT TAAATGAAGT TGTAACAGGT TTAACCGGCG GAACACAATA TTATTACCGA
GTGAGAGCTA AAACAGAAGC CCAAATTTCG GATTATTCAA ATGTGATTAG TGTTGTTACT
ACAGGTTCTA ATGGCATTCC CGAAGATCCT ACTTTTTTAA AGGTTAAAGT AAATAAATTA
GCGAACCCGT TTTTTGTAGG TATGGCAATA AAAGCTTCAC AGCTTACAAA CGGAACACCT
TATGATGTTA TCCTGAGAAA TGAATTCAGC AGTATTTCTG CAGAATACGA AATGAAAATG
GATCAAATTT CGACTGCAAG CGGTGTTTAC AACTGGACTG TAGCTGATAA AATTGTGGCG
TACGGAAATG CCAATAACAT CAATGTGCAC GGTCATGCTT TAGTATGGCA TAATGCAGTG
CCGCAGTGGC TGAAAGATTT CTCTGGAACT GATGCTGAGT TTGCTGCAGA AGTAAAAAAA
TACATTACAG ATGTGGTTAC ACATTATGCA GGAAAAGTAA AATCATGGGA TGTGGTTAAC
GAAGCTGTTG ATGATAACGG CGGTGCTATG AGAAATACAA TTTTCTTGCA GCGAATGGGA
CCAAACTATG TAAAAGACTG TTTTCAATGG GCCAGAAATG CTGCAATTGC TGCAGGTGAC
ACTTCATTAT TGTTGTTCTA TAATGATTAT GCTACGTCAA CTAATATTGC AAAACAAGAT
AAAGTGTTTG CTATTCTAGA GGATTTAAAA ACTGCAAAAG TTATTGACGG TGTTGGTTTT
CAAATGCACA ACACTTATTT GAGCCCAACC AAAGCACAGA TAGAAACAGA TCTAAACAGA
GCGGTGGCAA AAGGTTTAAA AATTCATGTT TCAGAATTGG ATATACAAGT AAACCAATTT
AATGATATTT CTAGTTTTAC AAACGAAAGA AGACTGGCTC AAAAAGCAAA ATACAAAGAA
ATAGTAAAAA TTTATAATGC GCTTCCGGCA GCAAATAAAT ATGCCTTAAC CATTTGGGGA
ATGAAAGATA ATGAATCATG GATTCTGTAC AGCACTGAAC TGAACCATCC AGGAAATGAC
TGGCCTTTAT TGTATGATTC TAATTTTGCA GTCAAAAGTT CACATACCGG ATTTTTAGAA
GGTTTAGATT AA
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| Protein sequence | MKSKFLLMLI SVVFFLNACS KDDNDAAEIL ETPVANAPKD VNDNGFKAKW NYVSHSKSYL
LDVSTSEDFT TILPNYNSKE VTDLNEVVTG LTGGTQYYYR VRAKTEAQIS DYSNVISVVT
TGSNGIPEDP TFLKVKVNKL ANPFFVGMAI KASQLTNGTP YDVILRNEFS SISAEYEMKM
DQISTASGVY NWTVADKIVA YGNANNINVH GHALVWHNAV PQWLKDFSGT DAEFAAEVKK
YITDVVTHYA GKVKSWDVVN EAVDDNGGAM RNTIFLQRMG PNYVKDCFQW ARNAAIAAGD
TSLLLFYNDY ATSTNIAKQD KVFAILEDLK TAKVIDGVGF QMHNTYLSPT KAQIETDLNR
AVAKGLKIHV SELDIQVNQF NDISSFTNER RLAQKAKYKE IVKIYNALPA ANKYALTIWG
MKDNESWILY STELNHPGND WPLLYDSNFA VKSSHTGFLE GLD
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