Gene Fjoh_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3860 
Symbol 
ID5093771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4575835 
End bp4576911 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content35% 
IMG OID644743282 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_001196190 
Protein GI146301599 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT TATTACAATG GACTATTATC ATTCCGGCAT TATCATGGAT CCTTTTCTTC 
AGCGGACTTA TAGAGGGAAG CAGTATTTTT CAAATTGCAG CTAGTATATT ACTTATTTTA
AGCGTTATGT CGGCTGTACA CCATTCCGAA ATAATAGCAG AAAGAGTTGG AGAGCCTTAC
GGAACAATTA TTTTGGCCAT ATCAATTACC GTAATAGAAG TTTCGATAAT TATATCCTTA
ATGATGTCAG ATGGCCCGGA AGCAGTTTCA CTTGCCAGAG ATACAGTATA TGCGGCAACC
ATGCTTATTC TTAACGGAAT TATTGGGCTC TGTCTTTTAA TTGGAGGTTT AAAACATTAT
GAGCAGAATT TTTCTGCTTC TTCTGTAACC ATTGGTTTAG TATCCCTTAT TTCAATTATA
GTATTTACAC TCGTATTTCC AACTTTTACA GAAAGTGTTT CAGGATCATA TTATTCAGAA
CCGCAGCTTG TTTTTGCTTC TATTGCCTGC ATAGTAATTT ATTCCTCTTT TCTGTTTGCA
CAAACTACAC GATACCGTCA ATATTTCCTG ACTGAGGGTG AGGATGAGAA TGACGATACT
GCTAAACGTA TTACAATTGA TACTAAAACA TTCTATACCA GTTTGGTATT TCTAATTGTC
AGTTTAGGCA TTGTAGTATT ACTTGCTAAG ACACTCTCAC CTACTATCGA AAGTATTATT
GTGAGTTACA GACTTCCAAA AAGTCTGGTT GGAGTTATAA TTGCCATTAT TATTCTGCTG
CCCGAAGCTG TGGCTGCTAT TATCGCAGCA AGAAAAAACA GATTACAAAC CAGTATAAAT
TTAGCTTTGG GTTCAGCTTT GGCAAGTATT GGATTAACGA TTCCCAGCGT TGCGGCAGTC
TGCATTATAA TGGATATGCC CATTATATTA GGGCTCGATA TTAAATCTAT TGTTTTATTA
GCTTTATCTG TATTTACCGT AATGCTGTCA CTTAGTAAAG GAAAGTCGAA TATAGTTTAC
GGAGTTGTAC TTCTGGTTAA CTTATTTGCT TTTATTTTCC TTATGATATA TCCGTAA
 
Protein sequence
MKRLLQWTII IPALSWILFF SGLIEGSSIF QIAASILLIL SVMSAVHHSE IIAERVGEPY 
GTIILAISIT VIEVSIIISL MMSDGPEAVS LARDTVYAAT MLILNGIIGL CLLIGGLKHY
EQNFSASSVT IGLVSLISII VFTLVFPTFT ESVSGSYYSE PQLVFASIAC IVIYSSFLFA
QTTRYRQYFL TEGEDENDDT AKRITIDTKT FYTSLVFLIV SLGIVVLLAK TLSPTIESII
VSYRLPKSLV GVIIAIIILL PEAVAAIIAA RKNRLQTSIN LALGSALASI GLTIPSVAAV
CIIMDMPIIL GLDIKSIVLL ALSVFTVMLS LSKGKSNIVY GVVLLVNLFA FIFLMIYP