| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3857 |
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| Symbol | |
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| ID | 5093768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4570513 |
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| End bp | 4573746 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644743279 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001196187 |
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| Protein GI | 146301596 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATG ATTTTTCCAG GCAGTATGCT CTTGTCTTGT GGATTTTATT TTTTGGAGTT
TTTCTCGGAA CAAATACTAT TTATTCACAG ACCGGCACTG TATCCGTTGA TTTTAAAAAT
TCGTCACCTC AAAAAATTAT AGATAATTTA AAATCACGTA CTCCTTACCA ATTTATCTAC
CAGAAAGACC TAGATCTTAG TTCGCCTCTT GTAACGCTAA AAAAAGATAA CGTTTCGATA
GATGAAATTT TGAGTGATCT GCAAAAGATG ACCAACTTAA ATTTTAGAAG AAACGAAAAT
AATATAGCCG TAAATAGTAA GGACGCTGAC AAAAAAAAAA AGAAAGGAAA AATTACAGGT
AAAGTTGTAG ATATAAACGG ACTTTCGCTT CCGGGCGTTA ATATAAAAGT ATCGCTGCTC
AATTTTGGAA CACAGTCTGA TATTGATGGT AACTATGTTT TAGAATTAGA ACCTGGTGAA
TACACTATTG AAATTAGTGC TATTTCTTTT CAAACACAGC AAATTACCGG CGTAAAAGTA
ACTGAAGGAG AAGATACACC ATTGGTAGTT TCTTTAAAAG AAGATGCACA GTCGCTTAAA
GAAGTTGTAA TTGTACAAAA TTATAAACAG GCAACAGCTT CTGTTCAGGG ATTGTTATTA
CAGCAAAAAA AAGCAGCACA GTTTTCTGAT GGTATTTCAG CAGAGCAAAT TGCCAGAACG
CCGGACAGAG ATGTAGCAAG TTCTTTAAAA CGTATTACCG GAGTTACTAC AATCGATAAT
AAATATGTAG TTGTACGCTC GATGGGAGAA AGATGGAATC AGGCAGTTAT GGATGGAATC
GCGCTTCCAA GTACAGATGC TTATCAGCAA AATTTCTCTT TTGATATTAT TCCAACTTCT
ATGGTAGAGA GTATTGTGGT GAGTAAATCT GCAACTCCAG ACATGAATGC TAATTTTGCC
GGAGGATATG TAGAAATAAA AACGAAAGAC ATACCAAAAG AAAATTTTAC AAGTTTTTCA
ATAAGTTCTT CATATAACAG CCGAAGTGCT TTTAAAGAAA GGTTAACCAA ATCAGAGGGT
AAATACGATT ACTGGGGATT TGATGACGGC CGACGCGATT ATCCTAATTT ACAGCCAATA
GAAATTCCAA CAAATGAAGC TTCTTCGGGG CCGTTTATAG AACAGTCTAA AAAATTTACG
CAGGACAATT TTTCTACTTA TAAAACTTAT GGCGCGCCGG GAACAACAAT TCAGTTTGCC
ATAGGAAGGT CTTATAAATT AAAAGACAAC AATAAATGGG GATTTGTAGG ATCTCTTCTT
TTTAAAAATA CTCAGGAAAA ACTGGATATT GAGCATACAG AAAGAGGAAG ATTTTTAACG
AATACCAGAT TTGTACAAGA AGGACAGGGC GGAAGGGAAT ATTCTGTTTT TGAAAAATTT
GGATTTAAAA ATTCTGGTGC TAATTACAAT TTTAATTCCA CTTTGGGAGG AATGTTTAAT
ACTGCAATTC AACTTGGCGA TCATAAAATT ACAAGCCGTA ATACAGTAAT GCATATCTAC
AACAATCAGC TCAATCAAAT TACAGGATGG GACAAAGGTA CCGGTGTTCC TGAAGTTTTA
GATGGTACAA ACCTGCCTTC AACAACAGAA ACAAATTATC CAGTATATCA AACTTTTATT
CAGAATAAAA TAGAAGGAAA TCATCGTTTT AATAAGTTGG AAGTGAACTG GTACGGAAGT
TACAGCAGTA TAACAAAAGA TACAAAAGAT GCCACTTTTT TAGAAACATT TCGAAAAAAT
ATTGGCGATG ATATGCTCGA ATATCATAGT GTTTATAATA GCGGCGGAAG ATTTCCTTTC
AGCAGGGACA ATTATACTAA TGACGAATCT GATTATAATT GGGCTGCCAG TCTTGACTAT
TCATTCAATT TAGGTGAAAA TAGTAAAAAC GATATTAAAG CAGGTTATTT TGGAACATAC
AAAAAAGCTT CAAATCAGCA GCGTTCTGCA AAAGTTGTAA CTGTAGGGCA GGGTACAGAC
AGAGCAGATA TATACGAACC TCTTTCTGAA TTTTTAGATG GCTCACAATA TTATTATGGA
GGTTTTGGCT GGATGGATTA TGGTAAATAC GGAGACAAAT ACGAAGGAGA AGTAAAAATT
CATTCACCTT ATTTAATGCT TGATAACAAA ATTGGACGCT TTATTAGATT TGTATGGGGA
GTAAGGGCAG AGAGCTACGT CTACAATGAA ATTTCAAATC AGTTTGAAGC TCCGGGAGAA
TTTCCTTTAA CCAACGTAGA CAAGAAATGG CAGTTCCTGC CCTCAGCAGG TTTAACCATC
AGCCCAACTC AAAAAACAAA TCTAAGACTT GGTTATAACA GGTCTGTACT GCGTCCTCAA
TTTGCAGAAC GCGTAGGAAC TCCATACTAT GATCCGATAC GTTCAGCTAA AATTTTGAAC
TGGTCTGCCG GAATGATTTC TAGTGTATCC AATAATTATG ATTTAAAATT AGAATGGTTT
CCCTCCGGCG GTGAAGTTTT ATCATTTGGC GTTTATCATA AAGATATTAA AGATCCTATT
GAATCTGTAG GGACGGTAAA TGGTAATTCA GGAATTATTT ATAATCTAAA TTCTAATAAT
GCCAAGTTGT GGGGTGTAGA AATGGAGTTT TATAAAAACC TTTCTTTCTT AGGTGATGGT
ATTATTTTAG AACAATTGTT TGTTTCAGGA AATGCATCCT TTAACGCTAC AAAAGTGACT
TCTTATGTAA ATGTTGATGG AACTGGAGGT CTTTATGAAG CTAATAGACC GCTCTATGGT
CAATCGCCCT ATACTTATAA CCTGGGTTTA GATTATACAG GAGACAGACT AGGTTTCAGC
GTTAGACATA ATGCTATTGG CGATCAGTAT ATTTTAGTAG GATTTGAATA TTCTCGTGAA
GAAATTAGAA TGCCGTATTC TACAACAGAT GCTCAGATAA GTTATAAGTT TTTTAAAGAT
AAAAATCTGG AGTTAAAATG CAGTATGAGA AATATTTTCG ATACAGGAAT TCAAACCTAT
AACAATGCTA ACAGCTACTC ACATCTCGAA GATGTATCGT ATGGTTCAAA TCCGCGTGAC
CGATACACAT TAGGAGCAAA TGCAACTAAA AAATACGACG AAGATATTGA TCAGGTAATA
TTTAAAGCTT TTAGCGGACG AACTATAAAT GTGTCTATTA ATTACTCATT TTAA
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| Protein sequence | MNNDFSRQYA LVLWILFFGV FLGTNTIYSQ TGTVSVDFKN SSPQKIIDNL KSRTPYQFIY
QKDLDLSSPL VTLKKDNVSI DEILSDLQKM TNLNFRRNEN NIAVNSKDAD KKKKKGKITG
KVVDINGLSL PGVNIKVSLL NFGTQSDIDG NYVLELEPGE YTIEISAISF QTQQITGVKV
TEGEDTPLVV SLKEDAQSLK EVVIVQNYKQ ATASVQGLLL QQKKAAQFSD GISAEQIART
PDRDVASSLK RITGVTTIDN KYVVVRSMGE RWNQAVMDGI ALPSTDAYQQ NFSFDIIPTS
MVESIVVSKS ATPDMNANFA GGYVEIKTKD IPKENFTSFS ISSSYNSRSA FKERLTKSEG
KYDYWGFDDG RRDYPNLQPI EIPTNEASSG PFIEQSKKFT QDNFSTYKTY GAPGTTIQFA
IGRSYKLKDN NKWGFVGSLL FKNTQEKLDI EHTERGRFLT NTRFVQEGQG GREYSVFEKF
GFKNSGANYN FNSTLGGMFN TAIQLGDHKI TSRNTVMHIY NNQLNQITGW DKGTGVPEVL
DGTNLPSTTE TNYPVYQTFI QNKIEGNHRF NKLEVNWYGS YSSITKDTKD ATFLETFRKN
IGDDMLEYHS VYNSGGRFPF SRDNYTNDES DYNWAASLDY SFNLGENSKN DIKAGYFGTY
KKASNQQRSA KVVTVGQGTD RADIYEPLSE FLDGSQYYYG GFGWMDYGKY GDKYEGEVKI
HSPYLMLDNK IGRFIRFVWG VRAESYVYNE ISNQFEAPGE FPLTNVDKKW QFLPSAGLTI
SPTQKTNLRL GYNRSVLRPQ FAERVGTPYY DPIRSAKILN WSAGMISSVS NNYDLKLEWF
PSGGEVLSFG VYHKDIKDPI ESVGTVNGNS GIIYNLNSNN AKLWGVEMEF YKNLSFLGDG
IILEQLFVSG NASFNATKVT SYVNVDGTGG LYEANRPLYG QSPYTYNLGL DYTGDRLGFS
VRHNAIGDQY ILVGFEYSRE EIRMPYSTTD AQISYKFFKD KNLELKCSMR NIFDTGIQTY
NNANSYSHLE DVSYGSNPRD RYTLGANATK KYDEDIDQVI FKAFSGRTIN VSINYSF
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