| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3836 |
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| Symbol | |
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| ID | 5093747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 4545089 |
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| End bp | 4546849 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644743258 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001196166 |
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| Protein GI | 146301575 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.742198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGA AAAAAATATC CGTTGCAAAA TACCTGCAGA TACGTCTTGA ACAATTAGGA
TTAACACATT TATTTGGGAT TGCAGGCAAT TATACTGCAC CCTTTTTAAA TACAATTCAC
GAAGATAAAA ATGCGAAAAT TAAAATCGTT AACGACACAA ATGAAATAAA TGCCGGACAC
TGTACTGATG CCTATGCACG TCAAAACGGT TTCGCTGCAG TAGCGGTAAC CTATGGCGTA
GGCGCATTTA CACTGCTTAA TTCAGTTGCA GGTTCTTATG TAGAGCATTG TCCCGTGCTT
GTTATTAATG GAGGGCCTAC CAACAAAGAC CAGCAGCGAA GCCTGGTTCA GGGTATGCTG
GCATCACATA TGACGGGAGA CATGTATAGT AATATCAATG TTTTTCGAAA CGTTACCGTT
GCAGCAGAAC AAATTACGGG TTCATCTGAT GCTCCTTACA AAATTGATTC CGTACTGAAT
GCCTGTATTT TATATGGAAG ACCGGTTTAT CTAGAAGTTT TTGAAGATGC CTGGCGAATG
GAATGCAATC CGCCTGACGC TCCATTAGCA GAAAGAGAAG TATCTAAATG TCAATCAAGT
GCACGCAAGG CTGCTAAAAG AGTAGCTGCA ATGGCACAGG GCAAAGAAAT TATTTTCTGG
GGAGGAATTG AGATCCAGCG CTATGGTATT CAAAAAGAAT TTTTGGATTT GATTGAAACA
ACCGATACAG AATTTGTGAC CTCAATACTT GGAAAATCAA TTGTGTCGGA AAACCATCCT
AAGTTCAAAG GCGTTTTTAA CGGTAAGGCA TCGCCAAAAG ATGTCAAGGA AAAATTCGAA
AAAGCCCAGC TTAAAATCGG CCTTGGCGTA TGGACCACAG GCAAAAACCT GGGTGGTTTT
GATGTTTGGA AAGATGATAC TGTACTTGCC AATCACAGCG GTGTAAGGAT TGGCGCCTCT
TACATCGCCA ATGTATCGTT GCGGGATTTT ATGATATTTC TAAAAGAAGA ACTTACTAAA
GTTAAATTTA GTGCTTATGA AATGTATGAC GCAGAACAGC TGCCTGAATC ATTTTTTGTA
GCGGATCAAA GCATTAGAAA AAATGCGAAA CCAACGCTTA CTTATGATAC CTTTTTCAAA
CGGATCAATA CTTTTATTGA CGAAAGGCAT ATAGTAGTGG CAGATGCCGG TTTTCCTTTA
TTGGGTGCAC AGGGAATTCG TATTGCAGAA CCAAATGGAT TTGTAGCGCA GGCATCATGG
CTTTCGATAG GTTATTCCGT TCCCGCCGCC ACCGGAATAA AATGTGCCAG ACCAGATAAA
AGACCCGTAG TATTTGTTGG AGACGGTGCT TTTCAGGAAA CATGCCAAGC TATATCTACA
CAGAATAAAC TAAAACACGA TACGGTTGTA TTTGTTTTGG ATAATGGAAT TTATGGTATT
GAACAAATGC TTGTTAATCC AAATCCTTTT CGCGGTGCAG AAAAGGTTGA ATACAGCATT
CCCGATCTAA ACGATATTTA TGATTACAAC CAGATGCACC GTTGGAAATA TGCAAAACTT
GTTGATGTAT TTGGAGGCAG AGGTTTTGAA GTCAGCACTC TCGACGAACT TAACGAAGTT
TTAAAACATC TTGAGAACAT TAAAGAAAAT ACTATCGTTC ATGTAAACAT TCCTAAAACA
TCTATTCCTG AATCAATTGC TTATAAGACA GAGGAGCCTG GAGAAGATGA ATTTCTGGAT
AAAGACTGGA GTTTATGTTA A
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| Protein sequence | MGQKKISVAK YLQIRLEQLG LTHLFGIAGN YTAPFLNTIH EDKNAKIKIV NDTNEINAGH
CTDAYARQNG FAAVAVTYGV GAFTLLNSVA GSYVEHCPVL VINGGPTNKD QQRSLVQGML
ASHMTGDMYS NINVFRNVTV AAEQITGSSD APYKIDSVLN ACILYGRPVY LEVFEDAWRM
ECNPPDAPLA EREVSKCQSS ARKAAKRVAA MAQGKEIIFW GGIEIQRYGI QKEFLDLIET
TDTEFVTSIL GKSIVSENHP KFKGVFNGKA SPKDVKEKFE KAQLKIGLGV WTTGKNLGGF
DVWKDDTVLA NHSGVRIGAS YIANVSLRDF MIFLKEELTK VKFSAYEMYD AEQLPESFFV
ADQSIRKNAK PTLTYDTFFK RINTFIDERH IVVADAGFPL LGAQGIRIAE PNGFVAQASW
LSIGYSVPAA TGIKCARPDK RPVVFVGDGA FQETCQAIST QNKLKHDTVV FVLDNGIYGI
EQMLVNPNPF RGAEKVEYSI PDLNDIYDYN QMHRWKYAKL VDVFGGRGFE VSTLDELNEV
LKHLENIKEN TIVHVNIPKT SIPESIAYKT EEPGEDEFLD KDWSLC
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