Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3820 |
Symbol | |
ID | 5089629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4527070 |
End bp | 4529337 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644743242 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001196150 |
Protein GI | 146301559 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.869603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA AAGATATAGT TAACCGTGAT TTGGTTACGT TGACCAATTG CGACCAAGAA CCTATACATA TTCCGGGACA AATCCAGCCG CATGGCTTTT TAATTGGGCT TACTAATGAT TGGATAATAG ACTATTGCAC CAGTAATATT TCATCTTTCA TTCCTCTAAG CCATACTCAG GCATTAGGAA ATAAATTTGC AGCTGTTTTT GGTACACAAG CGCAGGAACG TATTTTTAGT TATATAAATT CAGATACGGT GCAGGATGTG TTTCCTTTGG AAATAGAACT TCTTAACGAA AAGTTTCAGG TCAATATTCA CAAAAGTGAT GATATTTATG TTTTAGAAGC AGAACCTCAG TTCGACAAAC AGATTCTGGC AGACGTTTAT ACACAGACTA TCCAGTTTGT GACACAGATG AACAACACAA AATCGCTGAA AGATCTCTGT GCCCTGGTAG CAGAAGGTAC AAGGGAAATA ACTGGGTATG ACCGTGTAAT GATTTATCGT TTCGATGAGC AGTATAACGG TGAAGTTTAT GCAGAAAGCT GCAATAAAGA TCTTGAACCA TTTTTAGGAT TGCATTATCC GCATACTGAT ATTCCGGTAC AGGCCAGAGA ACTTTACATA AAGAACCAGC TCAGGTTGAT TGTAGATATT AATTATCAGC CAGTTCCTAT TTTTACAATC GATGACAGCA AGGACAAAAA CCTTGATTTA AGCCTTGCGA TTTTAAGAAG CACATCGCCC ATTCATGTTG AATATCTTAA AAATATGGGT GTCGGCGCAA CGCTTACTAT TTCACTTATA CACCATGACC GTTTGTGGGG TCTTATTGCA TGCCATCATT ATTCGAAAAA GAATATTTCT CCTGCGGTGC GCCTTGCTGC AAAACTTCAG GGGCAGTTCA TTACCTCGCA GATTGATATC CGGGAATCAA ACGATGAAAA TATTAATTCA AAGAAATCCA TTGAAGCATT AGAGCGTTTA ACAGCTCTTG ATCTGCCGCT GTCTGAAGAT TCCTTGAACG TTATAATCAA AATGCCCGAG CTGCTTGCCT TATGCAATTC AGGAGGAGTT TCGATAATGT TTCGAAATAA AATATACAGA AATGGTCTGA CTCCAGAAGA TGAACAGATA GAAGCTTTAG TGGAGCGAAT AGAGAATAAG AGAGTCGCCG AATTTTATGC GACCAGAAAA ATCAGCGATG ATTTTCCTGA ACTGGAAAGA TCTTCCAATT TTGCCGGAGT AATTTATCAT CCTCTTGGAA ATTCCAATCA CATCATCTGG TACAGGCCTG AAACTATCTC AGAAATTCAC TGGGCAGGTG ATCCGGAAAA AAGCATTGTT AAGGATGAAA AAGGGCTGCA TCCAAGAAAC TCATTTAATA TCTGGAAAGA GACTGTTAAA GGACAGAGTA CTATCTGGAG ACAGTATGAA ATAAATGCAG CGGCTAAATA TGCCCATTCT CTTCATAATA ATCTGATGAT GATTCTGCTG AGTGAGGAAG AAGAAAGATA CAGACTTCAA AGTGAAATCT TGAGAGAGAC TAATTCTGAA CTGGAAAATA TAAACTGGAT CAGTACACAT GATCTTCAGG AACCTCTTAG GAAAATACAA ATGATTACCT CTAAGCTGCT TTCTGAAAAA AAAGGCGACC GCGAAGATCC TGAATTTGAT TCACTGGAAC GTGTATCAAA ATCTGCTGCA AGGATGCGTG GACTGCTGCA GGATATTTTG AAATACACCC GTATTAAAAA CACCAGAGAG GCAGCTGAAA AAATTGACCT TAATCTCATT TTTGAAGATA CATTAGATGA AATCAGCGAA GCGATAACTG AAAATAATGC GGTTATTGAG TGTGAGAAAC TTCCGGAAGT TAATGCAATT GGGTTTCTCA TGAAGCAGTT GTTTTTAAAT ATTATTCAAA ACTCCTTAAA ATATGCTTCG CCTGACCGAT CACCTGTAAT TAAAATTACG GCTTCGCAGG AGCCGGTACT TATAAAAGAA TCGTTTAATG TATATTGTTC CTGGGTTAAA TTCTCGGATA ATGGTATCGG TTTTGATCAA AAGTACGCAG ATTCAATATT TAAAGTTTTT ACAAGACTTC ATACCCAGCA GCAATACAGC GGCTCTGGAA TTGGACTGGC GCTGTGCAAA AAAATTATGC AGACATTAGG AGGAACAATT ACAGCAGAGG GAAAAGTGGA CCAAGGTACC TCCATTACCA TTTATTTTCC CTGTGATTCG CAGGATACCC TTATCTAA
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Protein sequence | MKFKDIVNRD LVTLTNCDQE PIHIPGQIQP HGFLIGLTND WIIDYCTSNI SSFIPLSHTQ ALGNKFAAVF GTQAQERIFS YINSDTVQDV FPLEIELLNE KFQVNIHKSD DIYVLEAEPQ FDKQILADVY TQTIQFVTQM NNTKSLKDLC ALVAEGTREI TGYDRVMIYR FDEQYNGEVY AESCNKDLEP FLGLHYPHTD IPVQARELYI KNQLRLIVDI NYQPVPIFTI DDSKDKNLDL SLAILRSTSP IHVEYLKNMG VGATLTISLI HHDRLWGLIA CHHYSKKNIS PAVRLAAKLQ GQFITSQIDI RESNDENINS KKSIEALERL TALDLPLSED SLNVIIKMPE LLALCNSGGV SIMFRNKIYR NGLTPEDEQI EALVERIENK RVAEFYATRK ISDDFPELER SSNFAGVIYH PLGNSNHIIW YRPETISEIH WAGDPEKSIV KDEKGLHPRN SFNIWKETVK GQSTIWRQYE INAAAKYAHS LHNNLMMILL SEEEERYRLQ SEILRETNSE LENINWISTH DLQEPLRKIQ MITSKLLSEK KGDREDPEFD SLERVSKSAA RMRGLLQDIL KYTRIKNTRE AAEKIDLNLI FEDTLDEISE AITENNAVIE CEKLPEVNAI GFLMKQLFLN IIQNSLKYAS PDRSPVIKIT ASQEPVLIKE SFNVYCSWVK FSDNGIGFDQ KYADSIFKVF TRLHTQQQYS GSGIGLALCK KIMQTLGGTI TAEGKVDQGT SITIYFPCDS QDTLI
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