Gene Fjoh_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3808 
Symbol 
ID5089617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4516805 
End bp4517857 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content39% 
IMG OID644743230 
Product3-oxoacyl-(ACP) synthase III 
Protein accessionYP_001196138 
Protein GI146301547 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAA AAATAGTAAC AACTGCCAAG CAGCTGCCGC AATATTCACG CGAAACCAAA 
GACATACTTC CTATGCTGGA AGGCTGGCTT GACGGGCAGG ATGAACGTTT TATAAAAAAA
GTAAAAAAAA TATTTGAAGG TGCCGCCGTT GATAAACGTT ATTCAATAAT GGAGCCGCAA
GAAGTTTTTA CTGCCACGTC ATTTGAAGAA AAAAATGACA TTTATACGCG TGAAGTTATT
CTATTGGGCG AGCAGGTGCT TCAAAAAGCA CTTGAAAAAG CAGATTGGGA TCCAAAAACT
CTGGATTATA TCATTACCGT AAGCTGTACC GGCATAATGA TTCCCTCCTT AGATGCATAC
CTAATCAATA AAATGAACCT GAGACAGGAT ATTGTACGTC TTCCTGTTAC AGAAATGGGC
TGTGCTGCCG GTATATCAGG AATTATATAT GCTAAAAATT TTCTGAAGGC AAATCCACAA
AAACGCGCAG CGGTCATAGC TGTAGAATCA CCAACTGCCA CCTTTCAGCT TGATGATTTT
TCAATGCCTA ATATTGTCAG TGCCGCTATT TTTGGAGACG GTGCGGCCTG CTGTTTGTTA
TCTTCTTACG AAGATGATCC GGGTCCGGAA ATACTACAGG AAGAAATGTA CCATTTTTAT
GAAGCTGAAC ATATGATGGG ATTCAAACTT ACCAATACTG GTCTGCAGAT GGTTTTAGAC
ATTGAAGTTC CCGACACTAT TGCTTCTAAT TTTGACGATA TTATTCATCC GTTTCTTCAA
AAAAACAATT TAGAAATCAA GGATATAGAC CACATGATAT TTCATCCCGG CGGCAAAAAG
ATTGTGACGA CCGTTGAATC GCTTTTTGCA GGTTTGGGAA AAAATATAGA CGATACAAAA
GAAGTTCTCA AGCAGTATGG CAATATGTCG AGTGCCACTG TATTATATGT TTTAGAACGT
ATTATGGATG GAAATCCAAA ATCGGGAGAA AGAGGACTTA TGCTTAGTTT TGGTCCAGGA
TTTTCGGCAC AAAGAGTTTT ATTGCAATGG TAA
 
Protein sequence
MSVKIVTTAK QLPQYSRETK DILPMLEGWL DGQDERFIKK VKKIFEGAAV DKRYSIMEPQ 
EVFTATSFEE KNDIYTREVI LLGEQVLQKA LEKADWDPKT LDYIITVSCT GIMIPSLDAY
LINKMNLRQD IVRLPVTEMG CAAGISGIIY AKNFLKANPQ KRAAVIAVES PTATFQLDDF
SMPNIVSAAI FGDGAACCLL SSYEDDPGPE ILQEEMYHFY EAEHMMGFKL TNTGLQMVLD
IEVPDTIASN FDDIIHPFLQ KNNLEIKDID HMIFHPGGKK IVTTVESLFA GLGKNIDDTK
EVLKQYGNMS SATVLYVLER IMDGNPKSGE RGLMLSFGPG FSAQRVLLQW