Gene Fjoh_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3803 
Symbol 
ID5089612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4510643 
End bp4511779 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content34% 
IMG OID644743225 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001196133 
Protein GI146301542 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.818134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA CCCAAATCTC AGAATTGCTT AAAAAATATC AAGAAAAAAC TTTATCTGAT 
GAAGATCTGG ATAAACTTGA TGCGTGGTAT TTGAAAAAAG CGTCAAACAG CAATTTACAG
CTTAATGAAT ACGAGCTGGA AGATAGTTAC AAACTTCTAA AATCGAAATT ACCGCTGCAA
GAAGAAACTA AAGTAGTTCG TCTTTGGCCT CGAATAGCTG TTGCGGCTTC AATTGCTGTA
CTAATGGGTA CAGGAATATT TTATTTTACA CAGCCAAAAG AAGAAAAGGT TCAGGTTGCC
ACAAAACCAC AGGAAATTGC TCCGGGAGGT ACTAAAGGTG TATTGACACT TTCGAACGGA
AAACAAATTG TACTTTCTGA AATTACGGCA AAAGATACTA TTGCGCAAGA AGGAGAAGAA
AATGAAGTAA CAATCAAGAT GAACGCAAAT GGAGAAGTTA CCTATATTAT AAATCCAAAT
ACAGACGGAG GTAAAGATGA TAATTCATTC AACACTCTTT CAACACCAAT AGGAGGACAG
TATAATATTA TTTTAGCGGA TGGTACCAAA GTATATCTAA ATGCGGTTTC TTCTATTAAA
TATCCAACAC AATTCAACGG AGATAAAAGA GTTGTTGAGT TAGAAGGTGA AGCTTATTTT
GAAGTAGCCA AAAACAAAAA CAAACCTTTT ATTGTAAAAT CCAATAACCA GTCTATTGAA
GTATTGGGAA CACATTTTAA TGTTCATTCG TATAATAATG AATCGGTTGT TAAAACTACT
TTGTTAGAAG GAAGCGTAGC TGTTACTTAT AAAAATCAAA AAGCGATTTT GAAACCTGGA
CAGCAGTCTG ATGTATCTGA TAATTTTTCT AAAATTAAAG TAAAAGAAGT AGATCCGGAA
GAAGCGGTTG CCTGGAAAAA CGGCCGTTTC AAATTTGACA ATGCCGATCT GAAAAATGTA
ATGCGACAGT TGGAACGCTG GTACGGAATA AAAGTAGAAT ACCGTGGGAA TGTCTCTGAT
GTTCGTTTTA ACGGAGGTAC ATTTAGAAAT AAAAATTTGT CTGAAGTATT AAAAGTACTT
GAGCTTAGTA ATATAAAATT TAAGGTTGAA GGAAAAACAG TAATTGTAGA TCCCTGA
 
Protein sequence
MNKTQISELL KKYQEKTLSD EDLDKLDAWY LKKASNSNLQ LNEYELEDSY KLLKSKLPLQ 
EETKVVRLWP RIAVAASIAV LMGTGIFYFT QPKEEKVQVA TKPQEIAPGG TKGVLTLSNG
KQIVLSEITA KDTIAQEGEE NEVTIKMNAN GEVTYIINPN TDGGKDDNSF NTLSTPIGGQ
YNIILADGTK VYLNAVSSIK YPTQFNGDKR VVELEGEAYF EVAKNKNKPF IVKSNNQSIE
VLGTHFNVHS YNNESVVKTT LLEGSVAVTY KNQKAILKPG QQSDVSDNFS KIKVKEVDPE
EAVAWKNGRF KFDNADLKNV MRQLERWYGI KVEYRGNVSD VRFNGGTFRN KNLSEVLKVL
ELSNIKFKVE GKTVIVDP