Gene Fjoh_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3789 
Symbol 
ID5089598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4489859 
End bp4492345 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content44% 
IMG OID644743211 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001196119 
Protein GI146301528 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.725659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTGA ACACAGAAGA CCAATTGCCT GAGTATTCAT TTTTGAAAAA GGGAGGTGAA 
GCCGGATCCA TTTTACTGCA AAAAGACTGG AGCATCACAG CTCTGGGCAC TCCGAATAAC
TGGACGGAAA GCCTTAGAAC CGCTGCTGGA ATCATGTTTT CTTCACGTGT GCCCATGTTC
TTAGTCTGGG GTAAAGAAAA AACTCTTTTG TACAATGACC CTTTTATTAT ATTCCTTAGA
GAAAATAATA AACATCCTTA TGCATTAGGA AAAACACTAA CAGATGCCCT GCCCCAGGAT
TGGCTGGTGG TCTGCGATGC GGTGCAGGGA ATTATTGAAA AGGGAATTTT AAAATCCGAA
TCCAACATTA CTGCCACAGT AATGAGAAAC GGATTGCAGC AGAAAGTATA TCTTACTGCA
GGTTACAGTG TCATAACAAA TAAAAACGAT ACCATTGAAG GCGTTTTTGT GACCTGTCTG
GAAAATTCTG CCGTTATCCC GGATATGATC GGTTCAAGTT CTGTCCGTTC GCAGCTTAAC
AGCCTGCTGA TGCAGTCGAA TGCAGGAATT GCACAGGCCA ATATCCAGGG GCGCGTTGTG
GAAGTGAATG ACCGCTACTG CCAGATGCTA GGGTACAGCC GTGAAGAAAT CCTGCTGATG
AATTTAGGTG AGCTCACTCA TCCGGATGAT TTGCAGCGAA ATATGCTGTT GTTGCAGGAC
TGCATTGAAA ACGGAAAAGA TTTTTTAATT ACCAAACGTT ATATATGCCG TGACGGATCC
GTAATCTGGG TTAATAATAG CATTTCAGTT GTTATGGACC AGCTGGGTGA AAAGTACATA
ACGGCCATAG CTATCGATAT TACTGATCAA AAAGAAAAGG AGGAAAAACT GCTGGCTAGT
GAAGCTCATT TACAGCTTTT AAGAGATACA GTGCCGGCCA TGATTTTTTA TCTTGACCAA
GAGCAGCGCT ATGTCACTTA CAACACTGTT TTCAAAGAGT GGTTTTCCAT TGAAGGCGAT
CAGGCCGTTG GGAAAACTGT TCGGGAATTT TTGGGTGAAG CCGCTTATGC AAAAACGCTT
CCTCATCTTA AAATAGCTTA TGGCGGAAAA CAGGAAAAAT ACGAAATGTT TGCGCCGTCA
AGAATGGGAA TTAAAAGATG GCTCAGTATC GTTTATACAC CCCACAAAAA CCCTAAAGGA
ACTGTTGTGG GACTTATCGT GCATGCTACC GATATTACGC AGAGTAAACT GGCAGAATTC
GCCCTTCGTG AAAGCGAATC AAAGCTATTG TCTGCCGTAG AGGTGGCCCA GCTGGGTACT
TGGTCGCTGG ATATTGCTAC GGGTATCAGC ACCGTCTCGC AGCGCCATGC CGATATGTTT
GGACTGAGCG GTACTGTGAT GCCGGCCGAG GCTATCAGGA CTTTGATCAG ACCTTCGGAT
TATAAACGTG TAACGGAAGC CTTTTTAGGA GCCCAGAAGC AAGGTTCTAA CGGCAGTTAC
GAGGCAGAGT ATAGAATTAT GCATGGGAAG AACGGCAGGG AAAAGGTTAT TCATGCCGTT
GGACGGACCC ATTTTGATGA AAATGGAAAT GCTTTGTTTA TAAGCGGTAC TACTCAGGAT
ATTACCATTT ACAGGGAATT GCAGCTGGCG TTGGAAAGCG AAGTAGAAGT GCGAACCAAT
GAACTTGCTG TTGTTTTAAA AGAACTTCAG GAAGCCAACA AAGAGCTTGA ACAATCTAAT
AGAGCTCTAA AACACTCCAA TGAAGAGCTG GCACAGTTCG CCTATGTTGC CAGTCATGAC
CTTCAGGAAC CCCTGCGCAA AATTCAAATA TTCGCTGCCA TGCTGCAGGA TGGGAATTCA
GGAAGGGATC CAAAGACGAT TATTGGCAAA ATAACTGCTT CAGCGGCGCG TATGAGCCAG
CTGATCTCTG ATCTGCTTGC CTTTTCAAGA CTGATCCAGC CTGAAAAAAA TCTCCAGACA
GTGGATCTTA ACCGGCTGAT GGAAAGCATA TGGACTGATT TTGAACTGAC AGTTACCGAA
AGTGGAGCCG AATTAGATTT CGATAACCTG CCTGTGCTGC AGGCTGTGGC ATTACAGATG
AACCAGCTGT TTTATAATCT GGTAAGCAAT TCGCTTAAAT TCATTAGTCC GGACAGGACT
CCGAGAATAA AAATAAGTTC AGTGTTGCTG CCTTATGAGC AGGCCGCCTT ACTGAGCAGT
TCGGTACTGC TTTCTGTAAA CTACTTCCAT ATATCTTTTA TTGATAACGG TATTGGTTTT
GAAAAAGACC ACGAACAGCA GATTTTTGAA ATTTTCAAGC GCCTTCATGT TCAGACGGTT
TTTCCGGGCA GCGGCATCGG TCTGGCATTG TGCAGGAGGA TTGTTATGAA CCATCAGGGT
TTTATGTACG CTGAATCTCA AATTGGACAG GGAAGCACTT TTCATATTTT CCTTCCTGAC
CTACCTGCCG GAGAAATCCA GTACTAG
 
Protein sequence
MTVNTEDQLP EYSFLKKGGE AGSILLQKDW SITALGTPNN WTESLRTAAG IMFSSRVPMF 
LVWGKEKTLL YNDPFIIFLR ENNKHPYALG KTLTDALPQD WLVVCDAVQG IIEKGILKSE
SNITATVMRN GLQQKVYLTA GYSVITNKND TIEGVFVTCL ENSAVIPDMI GSSSVRSQLN
SLLMQSNAGI AQANIQGRVV EVNDRYCQML GYSREEILLM NLGELTHPDD LQRNMLLLQD
CIENGKDFLI TKRYICRDGS VIWVNNSISV VMDQLGEKYI TAIAIDITDQ KEKEEKLLAS
EAHLQLLRDT VPAMIFYLDQ EQRYVTYNTV FKEWFSIEGD QAVGKTVREF LGEAAYAKTL
PHLKIAYGGK QEKYEMFAPS RMGIKRWLSI VYTPHKNPKG TVVGLIVHAT DITQSKLAEF
ALRESESKLL SAVEVAQLGT WSLDIATGIS TVSQRHADMF GLSGTVMPAE AIRTLIRPSD
YKRVTEAFLG AQKQGSNGSY EAEYRIMHGK NGREKVIHAV GRTHFDENGN ALFISGTTQD
ITIYRELQLA LESEVEVRTN ELAVVLKELQ EANKELEQSN RALKHSNEEL AQFAYVASHD
LQEPLRKIQI FAAMLQDGNS GRDPKTIIGK ITASAARMSQ LISDLLAFSR LIQPEKNLQT
VDLNRLMESI WTDFELTVTE SGAELDFDNL PVLQAVALQM NQLFYNLVSN SLKFISPDRT
PRIKISSVLL PYEQAALLSS SVLLSVNYFH ISFIDNGIGF EKDHEQQIFE IFKRLHVQTV
FPGSGIGLAL CRRIVMNHQG FMYAESQIGQ GSTFHIFLPD LPAGEIQY