Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3789 |
Symbol | |
ID | 5089598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4489859 |
End bp | 4492345 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644743211 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001196119 |
Protein GI | 146301528 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.725659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTGA ACACAGAAGA CCAATTGCCT GAGTATTCAT TTTTGAAAAA GGGAGGTGAA GCCGGATCCA TTTTACTGCA AAAAGACTGG AGCATCACAG CTCTGGGCAC TCCGAATAAC TGGACGGAAA GCCTTAGAAC CGCTGCTGGA ATCATGTTTT CTTCACGTGT GCCCATGTTC TTAGTCTGGG GTAAAGAAAA AACTCTTTTG TACAATGACC CTTTTATTAT ATTCCTTAGA GAAAATAATA AACATCCTTA TGCATTAGGA AAAACACTAA CAGATGCCCT GCCCCAGGAT TGGCTGGTGG TCTGCGATGC GGTGCAGGGA ATTATTGAAA AGGGAATTTT AAAATCCGAA TCCAACATTA CTGCCACAGT AATGAGAAAC GGATTGCAGC AGAAAGTATA TCTTACTGCA GGTTACAGTG TCATAACAAA TAAAAACGAT ACCATTGAAG GCGTTTTTGT GACCTGTCTG GAAAATTCTG CCGTTATCCC GGATATGATC GGTTCAAGTT CTGTCCGTTC GCAGCTTAAC AGCCTGCTGA TGCAGTCGAA TGCAGGAATT GCACAGGCCA ATATCCAGGG GCGCGTTGTG GAAGTGAATG ACCGCTACTG CCAGATGCTA GGGTACAGCC GTGAAGAAAT CCTGCTGATG AATTTAGGTG AGCTCACTCA TCCGGATGAT TTGCAGCGAA ATATGCTGTT GTTGCAGGAC TGCATTGAAA ACGGAAAAGA TTTTTTAATT ACCAAACGTT ATATATGCCG TGACGGATCC GTAATCTGGG TTAATAATAG CATTTCAGTT GTTATGGACC AGCTGGGTGA AAAGTACATA ACGGCCATAG CTATCGATAT TACTGATCAA AAAGAAAAGG AGGAAAAACT GCTGGCTAGT GAAGCTCATT TACAGCTTTT AAGAGATACA GTGCCGGCCA TGATTTTTTA TCTTGACCAA GAGCAGCGCT ATGTCACTTA CAACACTGTT TTCAAAGAGT GGTTTTCCAT TGAAGGCGAT CAGGCCGTTG GGAAAACTGT TCGGGAATTT TTGGGTGAAG CCGCTTATGC AAAAACGCTT CCTCATCTTA AAATAGCTTA TGGCGGAAAA CAGGAAAAAT ACGAAATGTT TGCGCCGTCA AGAATGGGAA TTAAAAGATG GCTCAGTATC GTTTATACAC CCCACAAAAA CCCTAAAGGA ACTGTTGTGG GACTTATCGT GCATGCTACC GATATTACGC AGAGTAAACT GGCAGAATTC GCCCTTCGTG AAAGCGAATC AAAGCTATTG TCTGCCGTAG AGGTGGCCCA GCTGGGTACT TGGTCGCTGG ATATTGCTAC GGGTATCAGC ACCGTCTCGC AGCGCCATGC CGATATGTTT GGACTGAGCG GTACTGTGAT GCCGGCCGAG GCTATCAGGA CTTTGATCAG ACCTTCGGAT TATAAACGTG TAACGGAAGC CTTTTTAGGA GCCCAGAAGC AAGGTTCTAA CGGCAGTTAC GAGGCAGAGT ATAGAATTAT GCATGGGAAG AACGGCAGGG AAAAGGTTAT TCATGCCGTT GGACGGACCC ATTTTGATGA AAATGGAAAT GCTTTGTTTA TAAGCGGTAC TACTCAGGAT ATTACCATTT ACAGGGAATT GCAGCTGGCG TTGGAAAGCG AAGTAGAAGT GCGAACCAAT GAACTTGCTG TTGTTTTAAA AGAACTTCAG GAAGCCAACA AAGAGCTTGA ACAATCTAAT AGAGCTCTAA AACACTCCAA TGAAGAGCTG GCACAGTTCG CCTATGTTGC CAGTCATGAC CTTCAGGAAC CCCTGCGCAA AATTCAAATA TTCGCTGCCA TGCTGCAGGA TGGGAATTCA GGAAGGGATC CAAAGACGAT TATTGGCAAA ATAACTGCTT CAGCGGCGCG TATGAGCCAG CTGATCTCTG ATCTGCTTGC CTTTTCAAGA CTGATCCAGC CTGAAAAAAA TCTCCAGACA GTGGATCTTA ACCGGCTGAT GGAAAGCATA TGGACTGATT TTGAACTGAC AGTTACCGAA AGTGGAGCCG AATTAGATTT CGATAACCTG CCTGTGCTGC AGGCTGTGGC ATTACAGATG AACCAGCTGT TTTATAATCT GGTAAGCAAT TCGCTTAAAT TCATTAGTCC GGACAGGACT CCGAGAATAA AAATAAGTTC AGTGTTGCTG CCTTATGAGC AGGCCGCCTT ACTGAGCAGT TCGGTACTGC TTTCTGTAAA CTACTTCCAT ATATCTTTTA TTGATAACGG TATTGGTTTT GAAAAAGACC ACGAACAGCA GATTTTTGAA ATTTTCAAGC GCCTTCATGT TCAGACGGTT TTTCCGGGCA GCGGCATCGG TCTGGCATTG TGCAGGAGGA TTGTTATGAA CCATCAGGGT TTTATGTACG CTGAATCTCA AATTGGACAG GGAAGCACTT TTCATATTTT CCTTCCTGAC CTACCTGCCG GAGAAATCCA GTACTAG
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Protein sequence | MTVNTEDQLP EYSFLKKGGE AGSILLQKDW SITALGTPNN WTESLRTAAG IMFSSRVPMF LVWGKEKTLL YNDPFIIFLR ENNKHPYALG KTLTDALPQD WLVVCDAVQG IIEKGILKSE SNITATVMRN GLQQKVYLTA GYSVITNKND TIEGVFVTCL ENSAVIPDMI GSSSVRSQLN SLLMQSNAGI AQANIQGRVV EVNDRYCQML GYSREEILLM NLGELTHPDD LQRNMLLLQD CIENGKDFLI TKRYICRDGS VIWVNNSISV VMDQLGEKYI TAIAIDITDQ KEKEEKLLAS EAHLQLLRDT VPAMIFYLDQ EQRYVTYNTV FKEWFSIEGD QAVGKTVREF LGEAAYAKTL PHLKIAYGGK QEKYEMFAPS RMGIKRWLSI VYTPHKNPKG TVVGLIVHAT DITQSKLAEF ALRESESKLL SAVEVAQLGT WSLDIATGIS TVSQRHADMF GLSGTVMPAE AIRTLIRPSD YKRVTEAFLG AQKQGSNGSY EAEYRIMHGK NGREKVIHAV GRTHFDENGN ALFISGTTQD ITIYRELQLA LESEVEVRTN ELAVVLKELQ EANKELEQSN RALKHSNEEL AQFAYVASHD LQEPLRKIQI FAAMLQDGNS GRDPKTIIGK ITASAARMSQ LISDLLAFSR LIQPEKNLQT VDLNRLMESI WTDFELTVTE SGAELDFDNL PVLQAVALQM NQLFYNLVSN SLKFISPDRT PRIKISSVLL PYEQAALLSS SVLLSVNYFH ISFIDNGIGF EKDHEQQIFE IFKRLHVQTV FPGSGIGLAL CRRIVMNHQG FMYAESQIGQ GSTFHIFLPD LPAGEIQY
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