Gene Fjoh_3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3785 
Symbol 
ID5089594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp4486701 
End bp4487372 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content40% 
IMG OID644743207 
Productcyclase/dehydrase 
Protein accessionYP_001196115 
Protein GI146301524 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.720369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACTT CAACTATATC CAATAGAAAA GTAAGCTCAA AAAGCAATAT AAATGTTTCT 
CCATTTGAAC GCATCCTTAT GACAGCGGCA GGATCTTATC TGTTGTACAA AGGTTTGACC 
CAGGAAAAGA AAAACATTTC GCAGATTACA TCTGGAGGCG CCATGCTTGC CAGAGGTATC 
AGCGGCTATT GCCCAATTTA CAGCGCTGTA GATCATCTTA AAAATGACAA AGGCTCTAAT 
GTTAATATTA GGACCAATAT TACTATCAAT AAACCTATTA GTGAGGTTTA TGGCTTTTGG 
CGCAACTTAG AGAATCTTCC AAAATTCATG AACCATCTGG AATCAGTGAA AACAATCAAC 
AGTACACAAT CAGAATGGAC CGCTAAAGGA CCAGCAGGCA TTGGATCACT GAGCTGGAAA 
GCGGAAATCA TTAAAGACCA AAAGGAAAAG ATGTTAAGCT GGCAGTCTAC CCATGATGCG 
CCGGTTAAAA ACTTTGGAAA AGTACTGTTC AAAGCTCATG GAGACACCAC CGAAATAGAC 
ATCACCATAT CTTATCGTGC CCCTCTGGGA ATTGCCGGTC AAGGTGCAGC AAAACTGCTG 
AACCCTATTT TTGAGAAAAT CGTACGCGAT GATATTAAAG GATTTAAATC TTACCTTGAA 
ACCAAACAAT AA
 
Protein sequence
MHTSTISNRK VSSKSNINVS PFERILMTAA GSYLLYKGLT QEKKNISQIT SGGAMLARGI 
SGYCPIYSAV DHLKNDKGSN VNIRTNITIN KPISEVYGFW RNLENLPKFM NHLESVKTIN 
STQSEWTAKG PAGIGSLSWK AEIIKDQKEK MLSWQSTHDA PVKNFGKVLF KAHGDTTEID 
ITISYRAPLG IAGQGAAKLL NPIFEKIVRD DIKGFKSYLE TKQ