Gene Fjoh_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3775 
Symbol 
ID5089584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4473576 
End bp4475012 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content44% 
IMG OID644743197 
Productexodeoxyribonuclease VII 
Protein accessionYP_001196105 
Protein GI146301514 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAG TCCAGTATAT AAAACTCTCA CAGCTCAACG ACCAGATCCA GGATACGATC 
AATGCCCGCT TTAAGGGACA GACCTACTGG GTAGTGGCCG ATATTACCAA TCATTCTTTT
AAAGCGGATA AAAAGATCCA TTATTTTGAG CTGGTTGAGA AATCAGATAA AAGCAGTGCG
ATCACAGCAA AAATAATGGG CAAGAGCTGG GGATCCGGAG CACTGAGGAT CCTTGATTTT
GAAAGCAGCA CCGGACAGCG CTTTACCAAC AACCTGCATG TGCTGGTGCA GGTAAGCGTG
GATTTTCATC CGCTGTACGG CCTTTCGGTG AACCTTCTGG ATATCGACAG CAGTTTTATG
CTGGGGATTT TGGAACAGCA GCGCAACGCG ACACTTGAGA GGCTTGTAAA AGAAAATGAT
TTTATACACA AAGAAGGTGA TGGGTACTCT ACGCTGAACA GCCGTCTTAA ACTTGGGGCA
GTAATCCAGA GAGTTGCGGT CATTTCTTCG AGCAGTTCAG CAGGAAACGA GGATTTCCGC
CACACCATGC AGCATAATGA TTTTGGCTAT GTTTTCCAGA TCGATGACTA TCACACCGTT
GTTCAGGGGG ACAATAATGC CAAACTTTTT TTAAACAAGC TTATTGAGGT CTACAATACT
GGGATTCCTT ACGATGTCAT TGTTATTACA AGAGGCGGCG GATCACAGTC CGATTTTCTG
ATTTTTGACA ATTACAATAT TGGAAGGGCT GTCGCTAAAT TCCCTATTCC TGTTATAACC
GGCATCGGGC ACCAGAAAAA TATCAGCATT ACCGACCTCA TGGCCCATAC CCATACTAAA
ACGCCAACCA AGGCCGCGGA GTTCATCATT GCCCATAACA GGAGTTTTGA GCTGGGAATA
CTAGCGCTGC AGAAAAACAT CGTCATAAAA TCCCAGCAGC TTTTTCTGCA ATATCATAAC
GAGCTTAACA GTCTTAAAAA TGCTGTTGCC CATAATGCCA GGAAATTGAT CTCAGTGCAG
AAAGAAGAAC TGATGATGGC CCGGCAGCAT ATTGTTCAGA CAGGAAGATC CCTGTTAAAT
GACAAGAAAC AGCAGCTGCT TTTAACGGCG CAGCTTACCC TACAGCGGCC GCAGGGTATC
ATCCAGCAGA AAAACAGTAA TCTGCGGCAC TTAAAAGCAA ACTTAAAGAT TTTTACCAGC
CATTACCTGC GCAGCCGCAA ACTGCAATTG GAGGACTGCC GGAAAACCAT AAAACTGCTC
TCTCCGCAGC ATGTACTGAG CAGAGGGTAT GCTGTTGTAC GGGTTCATGA TAAAATTATA
AACGGAGCCG GCAGTATACA AGAAGGAGAG CAGATTGAAA TACTATTAAA AGATGCCATA
CTGAAAAGTA CGGTCAATGA AAAAATTCAT TATGATGGAA AACACACTGA CTTATGA
 
Protein sequence
MQPVQYIKLS QLNDQIQDTI NARFKGQTYW VVADITNHSF KADKKIHYFE LVEKSDKSSA 
ITAKIMGKSW GSGALRILDF ESSTGQRFTN NLHVLVQVSV DFHPLYGLSV NLLDIDSSFM
LGILEQQRNA TLERLVKEND FIHKEGDGYS TLNSRLKLGA VIQRVAVISS SSSAGNEDFR
HTMQHNDFGY VFQIDDYHTV VQGDNNAKLF LNKLIEVYNT GIPYDVIVIT RGGGSQSDFL
IFDNYNIGRA VAKFPIPVIT GIGHQKNISI TDLMAHTHTK TPTKAAEFII AHNRSFELGI
LALQKNIVIK SQQLFLQYHN ELNSLKNAVA HNARKLISVQ KEELMMARQH IVQTGRSLLN
DKKQQLLLTA QLTLQRPQGI IQQKNSNLRH LKANLKIFTS HYLRSRKLQL EDCRKTIKLL
SPQHVLSRGY AVVRVHDKII NGAGSIQEGE QIEILLKDAI LKSTVNEKIH YDGKHTDL