Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3735 |
Symbol | |
ID | 5089769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4433177 |
End bp | 4433689 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644743159 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001196067 |
Protein GI | 146301476 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0323381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA TAGTAATGCT TGCATTAGGA CTATTGAGTT TTAATTTGTC AGCACAGAGT CCGGAGAAAA AATTAAGTCA GTTAGGAATT CAATTGCCCC AAATACAAGA ATCCTTAGGA AGTTATGTGG ATATGGTGCA AGTTGGAAAT CTGGTCTTCC TTTCGGGAAG AGGACCGCTT AAAGCAGATG GGAAATACAT TGTCGGCAAA GTAGGACAGG AACTCACCAC TGATGACGGT TACCGAGCCG CCAGATTAAC GGCTATAAAT CAGCTGGCGA TACTTAAAGG TGCTTTTGGA AGCCTCAATA AAATAAAAAG AATAGTAAAG GTAAACGGTT ATGTAAATAC TGCCGATTTG TTTACTGAGC AGTCAAAAGT AATGAACGGC TTTTCAGATT TATTAATTGA AGTGTTTGGT GAGCAGGGCA GGCATGCGCG TACTTCCGTG GGGGTGTATA CCCTTCCGCA GAACATGGCC GTTGAAGCAG AAATGATTAT AGAAATGAAA TAA
|
Protein sequence | MKNIVMLALG LLSFNLSAQS PEKKLSQLGI QLPQIQESLG SYVDMVQVGN LVFLSGRGPL KADGKYIVGK VGQELTTDDG YRAARLTAIN QLAILKGAFG SLNKIKRIVK VNGYVNTADL FTEQSKVMNG FSDLLIEVFG EQGRHARTSV GVYTLPQNMA VEAEMIIEMK
|
| |