| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3710 |
|---|
| Symbol | |
|---|
| ID | 5092872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4401966 |
|---|
| End bp | 4402883 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644743135 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001196043 |
|---|
| Protein GI | 146301452 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA GGATACAAAA TAAAGATTTC CGAAGGCTCT TGGATGCCTT TGACAGTTTT
ATAAAGGTCA GGAATTACAA AACAGGAAAC AGCAGAATGT ACCAGAATAC CTTGATAGAA
TTCTTGGTCT GGCTGGAAGA ATCGGGAATC AGCAGGATTC AGGAGCTGAC TTCCAAAGAA
TCTATTAAAT ACTTTGAGTA TTTAATAGCA CGGCCAAAGC TCAGGGGCGA AGGAACACTG
TCACAGAAAA GCATCAAATT TCATCTTTTC GTACAGGGAT TGTTCCTTTT GAACCTGATG
GAAAACAAGG AAATTGAGAA CGGGTATTAC ATACCCAGTT ATGAGGGAGG CAATGAGAAA
GCCAGAAACA CACTTAGTGT TGAAGAAATA AAAAGCTTAT ATAAAAATGC AGAGAATGAA
CTTGAACGGG CTTTGCTCTC TGTAGCTTAT GGATGCGGGC TGAGGCGTTC TGAAATCAGT
GCGCTGGATT TAAAGGATGT AAAGCTGGCT ACGGGAATGG TTGTTGTCAG AAGCGGAAAA
AACAGCAAGA GGCGTGAAGT TCCCATGAGC GATACGGTTA TGGGATACTT AAAAAAGTAC
ATTCAGGAAG AGCGCAGTCA AAGGCTTGCG GGAAAAAACC AGACGGAAGA AGCCTTTTTT
ATTAATTCCA AAGGCAGGCG AAGTACAGGG GAAAACCTGA ATGATATCCT GAAAAAAATG
ATAGAGCAGA CTAAGAATTT TGAACTTATC CAAAAGGATA TTACGCTCCA CTGCCTCAGG
CACAGCATTG CCAATCATCT GGCTGAGAAT AATGCAGGGA TTGATTTTAT AAGAAGGTTT
CTGGGGCATT CCGATATCAA TACAACCTAT ATCTACGCTC TTAAAAACAA GAAACGAAAA
CCGATCGTAA CCTTTTAA
|
|---|
| Protein sequence | MKNRIQNKDF RRLLDAFDSF IKVRNYKTGN SRMYQNTLIE FLVWLEESGI SRIQELTSKE
SIKYFEYLIA RPKLRGEGTL SQKSIKFHLF VQGLFLLNLM ENKEIENGYY IPSYEGGNEK
ARNTLSVEEI KSLYKNAENE LERALLSVAY GCGLRRSEIS ALDLKDVKLA TGMVVVRSGK
NSKRREVPMS DTVMGYLKKY IQEERSQRLA GKNQTEEAFF INSKGRRSTG ENLNDILKKM
IEQTKNFELI QKDITLHCLR HSIANHLAEN NAGIDFIRRF LGHSDINTTY IYALKNKKRK
PIVTF
|
|---|
| |