Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3682 |
Symbol | |
ID | 5092844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4373638 |
End bp | 4374504 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644743107 |
Product | TPR repeat-containing protein |
Protein accession | YP_001196015 |
Protein GI | 146301424 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0338983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATA AATTTATCAC TTGGGATGAT TTTGTAAAAG GATTTGGTAA AGAGATGGTT TCCGCTGAAG ACGTATTTAA AAATATGTCT GACAGTGGAT TGAAAGACAA TTGTCTAACT AAAATGGATT TTACTTTTAT TTCTGACGAT AAGGAAAATC TAATCCGATT ATCTGAATTC TTAAGTTCCC ATTATCCATA TGTATTGCAT GAAGTTAAAA AATACGGATC ACTTTGGGAA GTAAACGGAG AAACAAATGA AATACCAATG ACTGCAGAAA ATTTAATGTA TTGGAGTTTG GATATGTACA AAAGAGGATA TGAATTTGAT TCAACTCTTG ATGCTTATGG AGGATTATTT GATCCGCGAA GCCCAAATTT TCCAGACTTG GCCAATTCGA AAGCGGAGTA CTATTTTGAT AAAGGTATTG ACTGTTATAA CAATGGAGAT TTAAGTGGCT CAATATTTAA TTGGTCATTG GCAATTGCAA TTGATTCGAA AGATTCAAAT GCTTATTATT CAAGAGCAAT TGTAAAGAAT GAACTTTACA CTTGGAAATC TGCTCTTAAA GATTATGACA AAGCTATAGA GATTGCTCCA AAATTTGGAA GTGCTTTAAT AAATAGATGC GGATTAAAAG ATGAAAACGG AGACTATCAA GGTGCGATTG CAGATTATGA AAAAGTACTG CAGTTTGATG ATTCATCACT TGAAAATAAG CAGCAGGCAT ATTTTAATCT TGGAAATACA AAACTTAATT TAAACGATAA AAGAGCAGCT TGTGAAAATT GGAATAGAGC ATTAGAACTT GGTGCCGATT ATGCTAAAGA TAAAATTGAT GAATACTGTA AAGGAAAAAA GAAATGA
|
Protein sequence | MENKFITWDD FVKGFGKEMV SAEDVFKNMS DSGLKDNCLT KMDFTFISDD KENLIRLSEF LSSHYPYVLH EVKKYGSLWE VNGETNEIPM TAENLMYWSL DMYKRGYEFD STLDAYGGLF DPRSPNFPDL ANSKAEYYFD KGIDCYNNGD LSGSIFNWSL AIAIDSKDSN AYYSRAIVKN ELYTWKSALK DYDKAIEIAP KFGSALINRC GLKDENGDYQ GAIADYEKVL QFDDSSLENK QQAYFNLGNT KLNLNDKRAA CENWNRALEL GADYAKDKID EYCKGKKK
|
| |