Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3670 |
Symbol | |
ID | 5092832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4364593 |
End bp | 4365468 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644743095 |
Product | phage integrase family protein |
Protein accession | YP_001196003 |
Protein GI | 146301412 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA AGAAACCCGA TCTGGAAAAT TACCTGAGAG GAATTGTAGC AGAGAAGACA GCGCAAAGCT ATCTCTATAC AATCAATCAT TTTTTAAAGA CCAATCCAAA GGCTAAAAGA TACCAGTACA AAGATATAGT CAAATACATG GATAAAATCA GCCAGAAACA GTCAAACGTG CAGTACCGAA TCAGAATACT CTCAGCCATT AAAAAATATT ATGACTATCT GGTGATGTAC GGCTATAGAA ATGACCATCC CTGCAGAAAA CTTAATATCA AGATTAAGGG CAACCAGACC ATTCAGGTGC AGGATCTGTT CAACAGAACA GAACTGCAGC TTTTAATGGA ACGCGAGAAC CGCTACAAAC ATCTTGACAT GAGAAACAAT GTTCTGATTT CACTTTTGAT CTATCAGGGG CTGGCAAGTG ATGAAATAGC AAGGCTGGCT GTAAAAGATA TTGATCTGGA TAACGGCACA GTTTACATAA AAGGCTCTGC CAATCTCAAT AAAAGAACGC TGGAGCTTGT GCCTAAGCAG ATGATACTGT TTCATAATTA CATAAATGAA ACACGTCCTG CCTTACTGCG CGGGAGCAGT GATAAATTCA TATTGACAAA GCTTGGACAG CCCATTGTTG TGAACAGCAT TCATGCCATG ATTGAGCCGT TAAGAGGATT ATTCCCAGAC AGAAAACTAA ACCCTCAGAC TATCAGAATG AGCGTGATCT GCAACTGGCT TAACGAGAAA AACATTTCAT TGGAAAGAGT TCAGGAACTG GCAGGGCATA AATGGCCGGG AACGACCGAG AAATATATCA AAGTCAACAG CTCACATCAG AGAGAACTGA TAAACAGATA TTTTCCAAGT ATTTAA
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Protein sequence | MENKKPDLEN YLRGIVAEKT AQSYLYTINH FLKTNPKAKR YQYKDIVKYM DKISQKQSNV QYRIRILSAI KKYYDYLVMY GYRNDHPCRK LNIKIKGNQT IQVQDLFNRT ELQLLMEREN RYKHLDMRNN VLISLLIYQG LASDEIARLA VKDIDLDNGT VYIKGSANLN KRTLELVPKQ MILFHNYINE TRPALLRGSS DKFILTKLGQ PIVVNSIHAM IEPLRGLFPD RKLNPQTIRM SVICNWLNEK NISLERVQEL AGHKWPGTTE KYIKVNSSHQ RELINRYFPS I
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