Gene Fjoh_3592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3592 
Symbol 
ID5093474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4286593 
End bp4287852 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content41% 
IMG OID644743017 
Productphage integrase family protein 
Protein accessionYP_001195925 
Protein GI146301334 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT TAGCAAAAAC CAAAGTGACC GTGCGTCTTC GAAAAGCAGA TGACCGAAAA 
GAATGGTATG TTTACATAGA AAGCTATCCT GTTGAGGTTT CTGGAAGGAA AACTCCCCAG
AGAATCCGTG AATATTTGAA CAGAACCGTA ACAACAGTGG AGTGGGATAA GAAAAGGACT
GCCCGGACAG ATGCAGCGGG ATCAAAGTCC TACAAACCCA AACGCAGCGA TAACGGAATT
ATAATCTGCA GAAGCGAAAG CGACTGTGCA ATAATGTTGT ATGCTGACGG AGTACGTAAA
ATAAGGCAGA AAGAATACGA TAATATTGAT CTATATACTG ATGCTGATAA ACTGTTGGCT
GAACAGAAAG AAAAAGGAAA AGAGGATTTT ATTAAATATG TTGCTGCTGT TGCTGCTAAA
AGGCACAACC GAAGTTCAAA ATCCATTCGC ATCAATTGGG AGCGGTTGGC AGAATTTTTA
AAAAGCTTTT CAAATGGCAG CTTGAATTTT TCTCAGATTG ACAGCAGAAT GGCTGAAGAT
TTTAAACTGT TTCTGCTGGG CGCGCCACAG GGAGGAGGCA AAAAGGGAAC CATTTCCCGT
AACACTGCGG GAACTTATTT TGCGATATTT AAAGCGGCTG TAAAGCAGGC ATTTATCGAC
GGATATCTAA CAGTTGATTT ATCTTCAAAA ATAAAAGGCA TTCCAGAGGA GGAGTCAAGA
CGTGAATATC TGACTATTGA AGAATTAAAT GCACTGGCAT CAACTGATTG TGAAAAAGAC
GTTCTCAAAA GAGCCGCGCT TTTCTCGGCC CTCACAGGTC TGAGGCATTC TGACATTCAG
AAGCTGCGCT GGAAAGAAAT AGCTGTAGAA GATGGGATGG CTAAACTGCA TTTTACGCAG
AAAAAGACAA AGGGTGTGGA ATATATGCCT ATTTCCCAGC AGGCTCTCCA GCTATGTGGA
GAGCCGAGGC TTCCCGGGCA GCTTGTTTTT GAAGATCTTC CAGACCCGTC GTGGATTTCT
CGCCCTCTGA AAAAATGGGT TCTATCGGCA GGCATTAAAA AAAATATTAC CTTCCACTGC
TTCCGACATA CATTTGCAAC ACTGCAGTTA TCCAGCGGTA CAGACATTTA TACGGTAAGT
AAAATGCTGG GACATACCAA CGTAAAAACT ACTCAAATCT ATGCAAAAGT GGTAGATGAG
AAGAAAAATA AAGCATCAGA AGCAATACAA CTGGTATCTT TAAAGAAAAA AGAGTTATGA
 
Protein sequence
MKQLAKTKVT VRLRKADDRK EWYVYIESYP VEVSGRKTPQ RIREYLNRTV TTVEWDKKRT 
ARTDAAGSKS YKPKRSDNGI IICRSESDCA IMLYADGVRK IRQKEYDNID LYTDADKLLA
EQKEKGKEDF IKYVAAVAAK RHNRSSKSIR INWERLAEFL KSFSNGSLNF SQIDSRMAED
FKLFLLGAPQ GGGKKGTISR NTAGTYFAIF KAAVKQAFID GYLTVDLSSK IKGIPEEESR
REYLTIEELN ALASTDCEKD VLKRAALFSA LTGLRHSDIQ KLRWKEIAVE DGMAKLHFTQ
KKTKGVEYMP ISQQALQLCG EPRLPGQLVF EDLPDPSWIS RPLKKWVLSA GIKKNITFHC
FRHTFATLQL SSGTDIYTVS KMLGHTNVKT TQIYAKVVDE KKNKASEAIQ LVSLKKKEL