Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3592 |
Symbol | |
ID | 5093474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4286593 |
End bp | 4287852 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644743017 |
Product | phage integrase family protein |
Protein accession | YP_001195925 |
Protein GI | 146301334 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAT TAGCAAAAAC CAAAGTGACC GTGCGTCTTC GAAAAGCAGA TGACCGAAAA GAATGGTATG TTTACATAGA AAGCTATCCT GTTGAGGTTT CTGGAAGGAA AACTCCCCAG AGAATCCGTG AATATTTGAA CAGAACCGTA ACAACAGTGG AGTGGGATAA GAAAAGGACT GCCCGGACAG ATGCAGCGGG ATCAAAGTCC TACAAACCCA AACGCAGCGA TAACGGAATT ATAATCTGCA GAAGCGAAAG CGACTGTGCA ATAATGTTGT ATGCTGACGG AGTACGTAAA ATAAGGCAGA AAGAATACGA TAATATTGAT CTATATACTG ATGCTGATAA ACTGTTGGCT GAACAGAAAG AAAAAGGAAA AGAGGATTTT ATTAAATATG TTGCTGCTGT TGCTGCTAAA AGGCACAACC GAAGTTCAAA ATCCATTCGC ATCAATTGGG AGCGGTTGGC AGAATTTTTA AAAAGCTTTT CAAATGGCAG CTTGAATTTT TCTCAGATTG ACAGCAGAAT GGCTGAAGAT TTTAAACTGT TTCTGCTGGG CGCGCCACAG GGAGGAGGCA AAAAGGGAAC CATTTCCCGT AACACTGCGG GAACTTATTT TGCGATATTT AAAGCGGCTG TAAAGCAGGC ATTTATCGAC GGATATCTAA CAGTTGATTT ATCTTCAAAA ATAAAAGGCA TTCCAGAGGA GGAGTCAAGA CGTGAATATC TGACTATTGA AGAATTAAAT GCACTGGCAT CAACTGATTG TGAAAAAGAC GTTCTCAAAA GAGCCGCGCT TTTCTCGGCC CTCACAGGTC TGAGGCATTC TGACATTCAG AAGCTGCGCT GGAAAGAAAT AGCTGTAGAA GATGGGATGG CTAAACTGCA TTTTACGCAG AAAAAGACAA AGGGTGTGGA ATATATGCCT ATTTCCCAGC AGGCTCTCCA GCTATGTGGA GAGCCGAGGC TTCCCGGGCA GCTTGTTTTT GAAGATCTTC CAGACCCGTC GTGGATTTCT CGCCCTCTGA AAAAATGGGT TCTATCGGCA GGCATTAAAA AAAATATTAC CTTCCACTGC TTCCGACATA CATTTGCAAC ACTGCAGTTA TCCAGCGGTA CAGACATTTA TACGGTAAGT AAAATGCTGG GACATACCAA CGTAAAAACT ACTCAAATCT ATGCAAAAGT GGTAGATGAG AAGAAAAATA AAGCATCAGA AGCAATACAA CTGGTATCTT TAAAGAAAAA AGAGTTATGA
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Protein sequence | MKQLAKTKVT VRLRKADDRK EWYVYIESYP VEVSGRKTPQ RIREYLNRTV TTVEWDKKRT ARTDAAGSKS YKPKRSDNGI IICRSESDCA IMLYADGVRK IRQKEYDNID LYTDADKLLA EQKEKGKEDF IKYVAAVAAK RHNRSSKSIR INWERLAEFL KSFSNGSLNF SQIDSRMAED FKLFLLGAPQ GGGKKGTISR NTAGTYFAIF KAAVKQAFID GYLTVDLSSK IKGIPEEESR REYLTIEELN ALASTDCEKD VLKRAALFSA LTGLRHSDIQ KLRWKEIAVE DGMAKLHFTQ KKTKGVEYMP ISQQALQLCG EPRLPGQLVF EDLPDPSWIS RPLKKWVLSA GIKKNITFHC FRHTFATLQL SSGTDIYTVS KMLGHTNVKT TQIYAKVVDE KKNKASEAIQ LVSLKKKEL
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