| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3553 |
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| Symbol | |
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| ID | 5093435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 4240960 |
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| End bp | 4242636 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644742978 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001195886 |
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| Protein GI | 146301295 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.566587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGC ATCGCTATCT CTTTCTTCTT ATTACCACTC AGTTAATTAT ATCCCAAGGA
AATAATTTCA AGATACCTGA TTCCTTAAGG AACAAGAACT ATGAATATCT TGACGATAAA
ATTTACTTCT ACAAAGGAGA TAGCACAAAA GCTGCAATAT ATATGTATAC GTATCTCTAT
AAGGCAAAAA AAGAACAGAA CTACACAGAA ATTGTCAATG GCTATCAAAA TATCCTTCAT
GAATCGCCAG AAAAACAAAG ATTAATTTAT GCTGACAGCA TGATATTGGA AGCACAAAAA
TCAGGTATGA ATACTTTACT GGGTTCAGCC TATCTGTCCA AAGGGATTGT ATATTATAGT
AGAAAAGAGC TTCATGAGGC CTTAGACAAT TACATAGAAG CAAACAAATA CATTTCCAAA
ACTTCGGACC AGTATTTAAA ATATAAGGTT AAGTATAATA TTGCCATTAT TAAATCCTAT
TTAGGTTATT ATGATGAAGC TATTGCCTTA TTGACTGAGT GTGTGGATCA TTTTAAGAAT
GAGGGGGCAA GACCCTATTT AAATTCTCTT CATGCCCTGG GACTTGCCTA CAATAAAATT
GGAAATTATG GCAAATGCAC CCAGACCAAT CTTTTAGGAC TATCCGAAAG CGAACGGCTG
GGAAATAAGG ACATGGTCCC CTATTTCATC CATTCCGAAG CAGTCAATCA ATTTTTTAAG
GAAGATTACA ATGATGCTAT AAAAAATCTT AAATCAGTAT CAGACCAGAT CAAAAAAAAT
GAAGATTTTG CAAGTGAATC TATAAGCTGT TTTTACATTG GCAAAAGTTA CTGGAAATTA
AAAAAGTATG AAAATGCCGT TTCTTATTTT TTAAAAGTAG ATCAAATTTA TAAAAGTCAT
GGCTATATCA GGCCTGATCT GCGTGAGGCT TATGAATTAT TAATCAAATA TTATAAAACG
AAGAACAACT TGGATTTACA ACTATATTGT ATTGATCAAT TGCTTCTGGC AGATAACTAC
CTTAATGAAA CCTATAAATA TTTGGTAAGT AAACTGCACA AGGAATACGA CACAAATGAG
CTTATCTTTG AAAAAGAACA AATCCAGGAG CAGTTCATAA AAAAGAAAAA ACAAGTTTAT
GCATTCACAG GTTTGGCAGT TTCACTGCTC TTGCTATCAT TGTTTTTGAC CTTTAACCAC
TTTAGAAACA GGAGACTTTA CAAAAAAAAC TTTGATCAGT TAATGCTGCA GTTGAATACT
GGTAAGGCTC CTAAAGATAA ATTCAGATCA TCTGGTGATA ATCTGGCAGA TATAAATCCT
GAAACGGTTT CCTATATAAT TAAACAGCTG GAAAAATTTG AAAACGAAAA AAAATTCCTG
CAGAAGGATT TAACTATCTC TAAATTGGCC GTAATGTTTA ATTCAAATCA AACCTATGTA
TCAAGAATCA TTCGTCATTA CAGCGGAAAA GCATTCAAAG ATTATATAAA TGATCTGAAA
ATTGAACACA TTATCGCCTT GCTTCACAAT AACAAAAAAA TAAGAAAATA TAATAATGTA
GCGTTGGCAG AAGAAGCTGG TTTCGGCAGC AAACAGCTCT TTGCGCAATT ATTTAAAGCC
AAAACAGGTA TGCCGACAGC TTACTTTATC GAACAGCTTA AAACGGAAAG TCTGTGA
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| Protein sequence | MTQHRYLFLL ITTQLIISQG NNFKIPDSLR NKNYEYLDDK IYFYKGDSTK AAIYMYTYLY
KAKKEQNYTE IVNGYQNILH ESPEKQRLIY ADSMILEAQK SGMNTLLGSA YLSKGIVYYS
RKELHEALDN YIEANKYISK TSDQYLKYKV KYNIAIIKSY LGYYDEAIAL LTECVDHFKN
EGARPYLNSL HALGLAYNKI GNYGKCTQTN LLGLSESERL GNKDMVPYFI HSEAVNQFFK
EDYNDAIKNL KSVSDQIKKN EDFASESISC FYIGKSYWKL KKYENAVSYF LKVDQIYKSH
GYIRPDLREA YELLIKYYKT KNNLDLQLYC IDQLLLADNY LNETYKYLVS KLHKEYDTNE
LIFEKEQIQE QFIKKKKQVY AFTGLAVSLL LLSLFLTFNH FRNRRLYKKN FDQLMLQLNT
GKAPKDKFRS SGDNLADINP ETVSYIIKQL EKFENEKKFL QKDLTISKLA VMFNSNQTYV
SRIIRHYSGK AFKDYINDLK IEHIIALLHN NKKIRKYNNV ALAEEAGFGS KQLFAQLFKA
KTGMPTAYFI EQLKTESL
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