Gene Fjoh_3551 details

Gene Information

• Locus tag: Fjoh_3551
• ID: 5093433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 4238750
• End bp: 4239445
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644742976
• Product: helix-turn-helix domain-containing protein
• Protein accession: YP_001195884
• Protein GI: 146301293
• COG category: [K] Transcription
• COG ID: [COG2207] AraC-type DNA-binding domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.427792
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTGC TGGTGATACC AAGCGATTCA TTTTGCAGCA TCGTGCAGTT TGAAGGAAAG 
CTTCAGTTTT ACCTGATCAC TTTCAGCTTT GAATTCGCAA TAAAAAATAG TTTGCGACAG 
GAACTAATTG AAGCCTTACA CTTTATAATT ACAAGAGCTT CAATTAAGAT AAAATTGGAT 
GAAAAGGAGA TGTTAATTCT ATCCTTGATA TATAAAGTGC TGTATTTTGT CACCAGAGAT 
CCAGCAGTTA GCGGTAATGA TAATGAACTG CATGGTATAA GTTTTAACCT ATTTATGTAT 
GAACTGAGAT TAATCTACGC AAAACATTCA AATGATTTTG CTCTGCAGTT TACGAGAAAA 
GAAAGTTTAA TAATTCGATT TCTCACTATT TTGTCTATTC ATTACAGAAA ACAGCACAAC 
GCCCAGTTTT ATGCCGGCTC CCTTTTTGTT ACAGCCGGCT ATTTAAATCA AATGGTAAAA 
GAAATAACAG GTAAAACCGT TAAGAAACTA ATTGTTGAGA CTATCATTTC GGAAGCAGAA 
AAACTGCTCG AAGATCCGCA TAATACTGTG TCTCAAATCG CTGAAGATTT GGAATTCACC 
AGTGCCAATA GTTTTACGGT CTTTTTTAAA AGGCATACCA ATTTATCCCC ATCTCAATAT 
CGTTTAAGTG CAATGGAAAA AAATAAGACA CGCTAG 

 

Protein sequence

MDLLVIPSDS FCSIVQFEGK LQFYLITFSF EFAIKNSLRQ ELIEALHFII TRASIKIKLD 
EKEMLILSLI YKVLYFVTRD PAVSGNDNEL HGISFNLFMY ELRLIYAKHS NDFALQFTRK 
ESLIIRFLTI LSIHYRKQHN AQFYAGSLFV TAGYLNQMVK EITGKTVKKL IVETIISEAE 
KLLEDPHNTV SQIAEDLEFT SANSFTVFFK RHTNLSPSQY RLSAMEKNKT R