Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3524 |
Symbol | |
ID | 5091202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4199474 |
End bp | 4200937 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644742949 |
Product | RagB/SusD domain-containing protein |
Protein accession | YP_001195857 |
Protein GI | 146301266 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAA TATATATATC ATTGTTTATA CTTGCTGGAC TCTTTTCGGG ATGTTCAGAT GATTTTTTAG ATGTTGATCA GACGGATAAA ATTCCTGTTG ATGTAGAATA TCTAAATACT GATAGTAAAG CTGCAGAATT GGTTACCTCT ATTTACAACC AGTTTTTATC TTGGGAAATG TCATCTTTTG GATGGAATGG GGTAACAAGT ATTATTTCTG ATGATGCAGA TAAAGGTTCT GACCCAGGGG ATACTGGTGC AGATAAGGAT GTATTGGATG CATTAACTTA CAATGCTTCA ACTCCATCAT TTGAAAGTGT TTGGAAAGCA AATTATGCCG GAATCAATAG ATGTAATCAG GCATTAACGT ATCTGCCGCA ATTAGACAAA GTAACTCCTG CATTGAGAAA TAGATTAATT GGCGAAGCAA AATTCATGAG AGCTTTCATG TACTTTACTT TAGTAAAAGG GTATGGTGCA GTCCCAATTG TTGACCGTTT AGCTAATATA CCGTTAACAC CAGAAGATAA AGAAATGCAG TTAACTCGTA GACCTGTCTC TGATGTTTAT GCTTTTATTG AAAAAGATTT AGCAGAAGCT GCTGAGGCGT TACCAGAAAA AAGCACTTAT TCAGGAAATG ACAAACAAAG AGTTTCAAAA GGTTCGGCTT ATGCATTATT AGCAAAAGTA AATTTATACT TGAAAAACTG GCAGGCTGTA ATTGATAATT GTGATAAAGT AATAGGCTAT TCATTAGTTG CGGATTATTC TTCACAATTT AAATTAGAAG GTGAATTTGG TTCAGAATCA ATTTTTGAAA TCAACGGTGT TGGTTCACCA ACTTCTGATC AAAAATTAGG AATTGGTAAC TATACTGTAT CTCAGGCACC AAGAGGTGCT GGAGGATGGG GCTGGGGTTT CAACACACCA ACTCAAGGCC TTGCTAATGC TTACGAGCCA GGTGATGTTA GAAAAAATGC TACAATTATC TTTAGAGGTT CAGTTTTATA TGATGGAAGA GTTGTGGCTT CAACAGTAAC AAATCCGATG TACAACTACA AAGCATACTC ATCAGATTTT TACAATCTTG AATTTACAGA TACAAACCTA AGATATTTAA GATATGCTGA AGTTTTATTA ATGAAAGCAG AAGCTCTTAA TGAATTGGGG CAGACAAGTG CAGCAGTTCC GTTCTTAAAC CAAGTAAGAC ACAGAGCTAA TTTAGGTGAT ACCCCTGCAG TTTCGCAAGC AGATGTTAGA ACCGCAATCT GGAAAGAAAG AAGGGTAGAA CTTGCTTTTG AACATGACAG ATGGTTTGAT CTTGTTAGAA CAGGTCAGGC GCAGGCAGCT ATGGCGGCAG ATGGAAAAAC ATTTGTGGTT GGAAAACATG AATTATGGCC TATACCAACA TTTTTCATTA GAGAATCAGT GGGATATTCA ACTCAAAACC CAGGCGGTTA TTAA
|
Protein sequence | MKRIYISLFI LAGLFSGCSD DFLDVDQTDK IPVDVEYLNT DSKAAELVTS IYNQFLSWEM SSFGWNGVTS IISDDADKGS DPGDTGADKD VLDALTYNAS TPSFESVWKA NYAGINRCNQ ALTYLPQLDK VTPALRNRLI GEAKFMRAFM YFTLVKGYGA VPIVDRLANI PLTPEDKEMQ LTRRPVSDVY AFIEKDLAEA AEALPEKSTY SGNDKQRVSK GSAYALLAKV NLYLKNWQAV IDNCDKVIGY SLVADYSSQF KLEGEFGSES IFEINGVGSP TSDQKLGIGN YTVSQAPRGA GGWGWGFNTP TQGLANAYEP GDVRKNATII FRGSVLYDGR VVASTVTNPM YNYKAYSSDF YNLEFTDTNL RYLRYAEVLL MKAEALNELG QTSAAVPFLN QVRHRANLGD TPAVSQADVR TAIWKERRVE LAFEHDRWFD LVRTGQAQAA MAADGKTFVV GKHELWPIPT FFIRESVGYS TQNPGGY
|
| |