Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3490 |
Symbol | |
ID | 5089691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4167870 |
End bp | 4168751 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644742915 |
Product | pirin domain-containing protein |
Protein accession | YP_001195823 |
Protein GI | 146301232 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.970505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATA TCAGTTTAAT TATCGAAGAA CGTGCTGCCA ATATTGGCAA CTTTATGGTA GGCCGTTTAC TGCCTTTCCG TGAAAAAAGA GCTGTTGGGC CATTTGTATT TATCGACCAT ATGGGACCCG CACATTTAAG TGACCATGAA AATATGGATG TTCCGCCTCA TCCGCATATC GGACTTTCTA CGCTTACTTT TTTGTTTGAA GGAAGCATTA TGCATCGCGA TAGTTTAGGA ACAGAATTGG AAATAAAACC CGGCGCTGTA AACTGGATGA CAGCCGGAAA AGGAATTGTA CATTCTGAAA GAACTCCTGA CTATTTAAGA CATTCAGATA AAATGCTGCA CGGATTACAG ATTTGGGTTG CGCTTCCAAA AGAATTGGAA CAAATGGATC CGAATTTCAC TCATGTTGAA GCAGATGATA TCCCAGCTTG GGAAGAAGAC GGCGTTTCAT ACAAATTGAT TGCAGGAGAA GCTTTTGGTA AAAAATCTCC AGTTCCGGTT TATAGTCCGC TTTATTTTAT TGAAATTAAG AGTAGAGAAG CTAAGAAAAT TAATATTGGA CACCATTTAT TTGGCGAAAG CGGTTTGTAT ATCTTAGAAG GAAGCATCAA AAACGGTGAA CATACTTACG ATCCGAGACA AATTTTAATT ACAACTGAAG CTTCTCTTTG CGAATTTGAA ATCGCTGAAA ACTCGACAGT ATATATTTTC GGCGGACAGC CATTCCCAGA AGAACATTTT ATCTTTTGGA ATTTCGTTTC ATCTGATAAA AACCTCATCG AAAAAGCTAA AAAAGACTGG ACAGAACAAA CTTTCCCAAA AGTTCCGGGA GAAACTGAAT TTGTTCCATT ACCTGAACCA AGAATTAAAT AA
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Protein sequence | MSNISLIIEE RAANIGNFMV GRLLPFREKR AVGPFVFIDH MGPAHLSDHE NMDVPPHPHI GLSTLTFLFE GSIMHRDSLG TELEIKPGAV NWMTAGKGIV HSERTPDYLR HSDKMLHGLQ IWVALPKELE QMDPNFTHVE ADDIPAWEED GVSYKLIAGE AFGKKSPVPV YSPLYFIEIK SREAKKINIG HHLFGESGLY ILEGSIKNGE HTYDPRQILI TTEASLCEFE IAENSTVYIF GGQPFPEEHF IFWNFVSSDK NLIEKAKKDW TEQTFPKVPG ETEFVPLPEP RIK
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