Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3484 |
Symbol | |
ID | 5089685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4160740 |
End bp | 4163187 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644742909 |
Product | primosomal protein N' |
Protein accession | YP_001195817 |
Protein GI | 146301226 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTTTA TCGAAGTTAT TTTACCGCTT TCCTTAGCAA AAACCTTTAC ATATCGTGTT TCTGAGGCTG AATTCCATTT TATTAAAAAA GGAATGCGGG TAGCGGTGCC ATTTGGTAAA AGCAAAATTT ATACAGCACT TGTATTAGAT ATACATGAAA ATGCGCCAAC CTTATATGAA GCCAAAGAAA TTCATCAAAT TTTAGATGAA AGGCCAATTG CAACCGAAAT CCAGATTAAA CACTGGCTTT GGGTAGCTAA TTATTACATG TGCGGTATTG GCGATGTATA TCGCGGCGCT TTTCCAACGG GATTACTGTT GGAAAGTGAA ACTATTGTTT CGCACAAACC AGATGTTGTT GTTAATGATT CTGAACTTTC TGATGATGAA TTTTTAATTT ATGAAGCGTT ACAGCATCAG AGTTCGCTTA AAGTTCAGGA AATAGCTTCT ATTTTAAATA GAAAAAATAT CCTCCCAATT CTTCAAAAAT TAATAGCAAG AGATATAATT TTTCTGGAAG AAGAAATAAA AGAAAGTTAT AAGCCTAAAC TGGTTCGTTA TGTTAAGCTG CACTCAAAAT ACGAAACAGA TCAAGGTTTG GGAAGCCTTC TTGATATTCT GAAAAATGAC AAGCAAAAAG AAATTGTTTT AGCTTATTTT CAAATTAGTG CTTCAGAAAA AAAGCCTGTT ACTGTTAAAA AATTAGTTGA GGTTTCTGGT TCTAGTTCGT CTGTTGTAAA AACTTTAGTT AAGAATGAAA TTCTTGAAGA ATATCTTTTG CAGCAAGACC GTGTTTTGTT TACCGGAGAA AAATCAGAAA AAGAATTATT GTTAAGTGAA GCGCAGCAAA ATGCTTTTAC AGCAATAAAA CAAAGTCTTA CTGAAAAAGA AGTCTGTTTG CTTCATGGAG TTACTTCGAG CGGGAAAACA GAAATTTACA TAAAACTAAT CGAAGAATAT CTGCATACAG GAAGACAGGT TTTGTATCTG CTTCCTGAAA TAGCCCTTAC CACTCAGTTA GTTTCTCGTC TGCGTCTTCA TTTTGGAGAC AAAGTTGCTG TTTTTCATTC AAAATACAGT AATAATGAAA GAGTTGAGGT TTGGAAACAG ACACTTGAAA ATTCTGAAAA AGCTCAAATA GTCATAGGGG CAAGATCGGC TTTGTTTTTG CCTTTTAATG ATCTTGGTCT GCTCATTGTT GATGAAGAGC ATGAGCAGAC TTTTAAACAA ACAGATCCGG CACCAAGATA TCACGCCAGA GATGCTGCAA TTGTATTAGC AAATTTTCAT AATGCTAAAG TTTTGCTTGG ATCTGCAACA CCAAGTATCG AGACTTATTT TAATACCCAG AATGATAAAT ATGGTTTAGT AACACTTACT GAACGCTATA AAAATGTTCG ACTGCCCGAA GTTGTTTTAG TCGATTTAAA AGACAAACAT TTTAGGAAGA GAATGACAGG GCATTTTAGT GATCTTTTAA TAGAAGAAAT TACTGAGGCT TTGTCTTTGG GTGAACAAGT GATTTTGTTT CAAAACAGAA GAGGATATTC ACCTATAATA GAGTGTTTGA CCTGCGGGCA CGTACCTCAT TGCCAGCAAT GCGATGTGAG TTTAACGTAT CATAAGTTTA AAAATCAGCT GCGTTGTCAT TATTGTGGAT ACGCTATTGC AAAACCAACG AATTGTCATA GCTGTTCAAG TATAGATTTA ACCACAAAAG GGTTTGGAAC AGAGCAGATA GAGCAGGAGC TGGCATCACT TTTTCCGAAA GCAAAAACGG CACGTATGGA TCAGGATACA ACACGCGGTA AATTTGGTTT TGAAAAAATT ATTGACACCT TTAAAAATCG AGAAATTGAT ATTCTTGTCG GGACGCAAAT GCTGGCAAAA GGGCTTGACT TTGATAATGT AAGTTTAGTG GGAATCATGA ATGCTGATAA TATGCTGCAT CATCCGGATT TTAGGGCTTT TGAACGCAGT TTTCAAATGA TGACTCAGGT TGCAGGAAGA GCAGGGAGAT CTGAAAAACA GGGAAAAGTT GTTATTCAGA CCTATAATCC AAATCATAAT ACAATTCAGC AGGTTACTAA CCATAATTAC AATGGTATGT ATAAGGAGCA GCTGTATGAC AGGCAGATCT ATAAATATCC TCCTTACTTC AGAATTATAA AACTTACTAT AAAACATAAA GATTTTGATA AGCTGAAAGA AGGCTCAATG TGGCTGTATC AGGTTTTAAG CCAAAATCTA AATATACCTG TTTTGGGACC TGAAGAACCG GCAATCAGCA GAATAAGAAA TGAATATATC CGAACAATTT TAATTAAGAT TCCGCAGAAT ATGCATTTGG GTAATACAAA AAAAACTATT CAGAAAATGT TGAATAGTTT TGAAGCTGTT GCTCAGTACA GAGCTATAAA AGTGGTTGTA AATGTCGATT TTTATTAA
|
Protein sequence | MFFIEVILPL SLAKTFTYRV SEAEFHFIKK GMRVAVPFGK SKIYTALVLD IHENAPTLYE AKEIHQILDE RPIATEIQIK HWLWVANYYM CGIGDVYRGA FPTGLLLESE TIVSHKPDVV VNDSELSDDE FLIYEALQHQ SSLKVQEIAS ILNRKNILPI LQKLIARDII FLEEEIKESY KPKLVRYVKL HSKYETDQGL GSLLDILKND KQKEIVLAYF QISASEKKPV TVKKLVEVSG SSSSVVKTLV KNEILEEYLL QQDRVLFTGE KSEKELLLSE AQQNAFTAIK QSLTEKEVCL LHGVTSSGKT EIYIKLIEEY LHTGRQVLYL LPEIALTTQL VSRLRLHFGD KVAVFHSKYS NNERVEVWKQ TLENSEKAQI VIGARSALFL PFNDLGLLIV DEEHEQTFKQ TDPAPRYHAR DAAIVLANFH NAKVLLGSAT PSIETYFNTQ NDKYGLVTLT ERYKNVRLPE VVLVDLKDKH FRKRMTGHFS DLLIEEITEA LSLGEQVILF QNRRGYSPII ECLTCGHVPH CQQCDVSLTY HKFKNQLRCH YCGYAIAKPT NCHSCSSIDL TTKGFGTEQI EQELASLFPK AKTARMDQDT TRGKFGFEKI IDTFKNREID ILVGTQMLAK GLDFDNVSLV GIMNADNMLH HPDFRAFERS FQMMTQVAGR AGRSEKQGKV VIQTYNPNHN TIQQVTNHNY NGMYKEQLYD RQIYKYPPYF RIIKLTIKHK DFDKLKEGSM WLYQVLSQNL NIPVLGPEEP AISRIRNEYI RTILIKIPQN MHLGNTKKTI QKMLNSFEAV AQYRAIKVVV NVDFY
|
| |