Gene Fjoh_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3484 
Symbol 
ID5089685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4160740 
End bp4163187 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content35% 
IMG OID644742909 
Productprimosomal protein N' 
Protein accessionYP_001195817 
Protein GI146301226 
COG category[L] Replication, recombination and repair 
COG ID[COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase 
TIGRFAM ID[TIGR00595] primosomal protein N' 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTA TCGAAGTTAT TTTACCGCTT TCCTTAGCAA AAACCTTTAC ATATCGTGTT 
TCTGAGGCTG AATTCCATTT TATTAAAAAA GGAATGCGGG TAGCGGTGCC ATTTGGTAAA
AGCAAAATTT ATACAGCACT TGTATTAGAT ATACATGAAA ATGCGCCAAC CTTATATGAA
GCCAAAGAAA TTCATCAAAT TTTAGATGAA AGGCCAATTG CAACCGAAAT CCAGATTAAA
CACTGGCTTT GGGTAGCTAA TTATTACATG TGCGGTATTG GCGATGTATA TCGCGGCGCT
TTTCCAACGG GATTACTGTT GGAAAGTGAA ACTATTGTTT CGCACAAACC AGATGTTGTT
GTTAATGATT CTGAACTTTC TGATGATGAA TTTTTAATTT ATGAAGCGTT ACAGCATCAG
AGTTCGCTTA AAGTTCAGGA AATAGCTTCT ATTTTAAATA GAAAAAATAT CCTCCCAATT
CTTCAAAAAT TAATAGCAAG AGATATAATT TTTCTGGAAG AAGAAATAAA AGAAAGTTAT
AAGCCTAAAC TGGTTCGTTA TGTTAAGCTG CACTCAAAAT ACGAAACAGA TCAAGGTTTG
GGAAGCCTTC TTGATATTCT GAAAAATGAC AAGCAAAAAG AAATTGTTTT AGCTTATTTT
CAAATTAGTG CTTCAGAAAA AAAGCCTGTT ACTGTTAAAA AATTAGTTGA GGTTTCTGGT
TCTAGTTCGT CTGTTGTAAA AACTTTAGTT AAGAATGAAA TTCTTGAAGA ATATCTTTTG
CAGCAAGACC GTGTTTTGTT TACCGGAGAA AAATCAGAAA AAGAATTATT GTTAAGTGAA
GCGCAGCAAA ATGCTTTTAC AGCAATAAAA CAAAGTCTTA CTGAAAAAGA AGTCTGTTTG
CTTCATGGAG TTACTTCGAG CGGGAAAACA GAAATTTACA TAAAACTAAT CGAAGAATAT
CTGCATACAG GAAGACAGGT TTTGTATCTG CTTCCTGAAA TAGCCCTTAC CACTCAGTTA
GTTTCTCGTC TGCGTCTTCA TTTTGGAGAC AAAGTTGCTG TTTTTCATTC AAAATACAGT
AATAATGAAA GAGTTGAGGT TTGGAAACAG ACACTTGAAA ATTCTGAAAA AGCTCAAATA
GTCATAGGGG CAAGATCGGC TTTGTTTTTG CCTTTTAATG ATCTTGGTCT GCTCATTGTT
GATGAAGAGC ATGAGCAGAC TTTTAAACAA ACAGATCCGG CACCAAGATA TCACGCCAGA
GATGCTGCAA TTGTATTAGC AAATTTTCAT AATGCTAAAG TTTTGCTTGG ATCTGCAACA
CCAAGTATCG AGACTTATTT TAATACCCAG AATGATAAAT ATGGTTTAGT AACACTTACT
GAACGCTATA AAAATGTTCG ACTGCCCGAA GTTGTTTTAG TCGATTTAAA AGACAAACAT
TTTAGGAAGA GAATGACAGG GCATTTTAGT GATCTTTTAA TAGAAGAAAT TACTGAGGCT
TTGTCTTTGG GTGAACAAGT GATTTTGTTT CAAAACAGAA GAGGATATTC ACCTATAATA
GAGTGTTTGA CCTGCGGGCA CGTACCTCAT TGCCAGCAAT GCGATGTGAG TTTAACGTAT
CATAAGTTTA AAAATCAGCT GCGTTGTCAT TATTGTGGAT ACGCTATTGC AAAACCAACG
AATTGTCATA GCTGTTCAAG TATAGATTTA ACCACAAAAG GGTTTGGAAC AGAGCAGATA
GAGCAGGAGC TGGCATCACT TTTTCCGAAA GCAAAAACGG CACGTATGGA TCAGGATACA
ACACGCGGTA AATTTGGTTT TGAAAAAATT ATTGACACCT TTAAAAATCG AGAAATTGAT
ATTCTTGTCG GGACGCAAAT GCTGGCAAAA GGGCTTGACT TTGATAATGT AAGTTTAGTG
GGAATCATGA ATGCTGATAA TATGCTGCAT CATCCGGATT TTAGGGCTTT TGAACGCAGT
TTTCAAATGA TGACTCAGGT TGCAGGAAGA GCAGGGAGAT CTGAAAAACA GGGAAAAGTT
GTTATTCAGA CCTATAATCC AAATCATAAT ACAATTCAGC AGGTTACTAA CCATAATTAC
AATGGTATGT ATAAGGAGCA GCTGTATGAC AGGCAGATCT ATAAATATCC TCCTTACTTC
AGAATTATAA AACTTACTAT AAAACATAAA GATTTTGATA AGCTGAAAGA AGGCTCAATG
TGGCTGTATC AGGTTTTAAG CCAAAATCTA AATATACCTG TTTTGGGACC TGAAGAACCG
GCAATCAGCA GAATAAGAAA TGAATATATC CGAACAATTT TAATTAAGAT TCCGCAGAAT
ATGCATTTGG GTAATACAAA AAAAACTATT CAGAAAATGT TGAATAGTTT TGAAGCTGTT
GCTCAGTACA GAGCTATAAA AGTGGTTGTA AATGTCGATT TTTATTAA
 
Protein sequence
MFFIEVILPL SLAKTFTYRV SEAEFHFIKK GMRVAVPFGK SKIYTALVLD IHENAPTLYE 
AKEIHQILDE RPIATEIQIK HWLWVANYYM CGIGDVYRGA FPTGLLLESE TIVSHKPDVV
VNDSELSDDE FLIYEALQHQ SSLKVQEIAS ILNRKNILPI LQKLIARDII FLEEEIKESY
KPKLVRYVKL HSKYETDQGL GSLLDILKND KQKEIVLAYF QISASEKKPV TVKKLVEVSG
SSSSVVKTLV KNEILEEYLL QQDRVLFTGE KSEKELLLSE AQQNAFTAIK QSLTEKEVCL
LHGVTSSGKT EIYIKLIEEY LHTGRQVLYL LPEIALTTQL VSRLRLHFGD KVAVFHSKYS
NNERVEVWKQ TLENSEKAQI VIGARSALFL PFNDLGLLIV DEEHEQTFKQ TDPAPRYHAR
DAAIVLANFH NAKVLLGSAT PSIETYFNTQ NDKYGLVTLT ERYKNVRLPE VVLVDLKDKH
FRKRMTGHFS DLLIEEITEA LSLGEQVILF QNRRGYSPII ECLTCGHVPH CQQCDVSLTY
HKFKNQLRCH YCGYAIAKPT NCHSCSSIDL TTKGFGTEQI EQELASLFPK AKTARMDQDT
TRGKFGFEKI IDTFKNREID ILVGTQMLAK GLDFDNVSLV GIMNADNMLH HPDFRAFERS
FQMMTQVAGR AGRSEKQGKV VIQTYNPNHN TIQQVTNHNY NGMYKEQLYD RQIYKYPPYF
RIIKLTIKHK DFDKLKEGSM WLYQVLSQNL NIPVLGPEEP AISRIRNEYI RTILIKIPQN
MHLGNTKKTI QKMLNSFEAV AQYRAIKVVV NVDFY