| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3483 |
|---|
| Symbol | |
|---|
| ID | 5089684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4160042 |
|---|
| End bp | 4160737 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644742908 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001195816 |
|---|
| Protein GI | 146301225 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.630225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA ACTGTGTTGT TGTAGATGAT AGTTCTATAC AGAGGACAAT TATTGCAAAA
TTAGTTAATA ATCACCCAGG TTTGCACTTA ATCGGGGATT TTTCTAATGC AATAGAAGCA
AAAAGTTGTA TCTCACTTAA TAATATCGAT TTAATATTTC TTGATATAGA AATGCCGGTT
ATTAACGGCT TTGATTTTCT TGATGGTTTA AAATCTAAAC CGCAGATTAT ATTTATTACT
TCTAAAGCCG AATATGCTTT AAAAGCTTTT GATTATGATG CTGCTGATTA TCTGCAGAAA
CCAATTGCTG TGGACCGTTT TAATGCTTCT GTAAAAAGAG CAATTGATAT GCATTTACTG
AAAAAAGAAG TTAAAGAAGA AGAAGGAGAG CATATTTTTA TAAAAAGCAA CCTTAAAAAA
CTTAAAATTT TCACTGCAAA AATCAAATGG ATTGAAGCTT TTGGGGATTA TGTGAGAGTA
GTTACTGAAG ACGACAGTAA CCTGGTACTT TCGACTATGA AATCTTTTGA AAATGATTTA
TCAAAAGACA AGTTCATACG CGTTCACAAA TCATATATTA TTAATATTGA TAAAGTTGAA
CGTTTCAATA GTAAATTTGC CGAAATCGGC ATCACTAAAA TTCCGCTTAG CCGAAATAAA
AAAGAAGATT TAGTAAAAGC TTTGTCAACG TCGTAA
|
|---|
| Protein sequence | MKLNCVVVDD SSIQRTIIAK LVNNHPGLHL IGDFSNAIEA KSCISLNNID LIFLDIEMPV
INGFDFLDGL KSKPQIIFIT SKAEYALKAF DYDAADYLQK PIAVDRFNAS VKRAIDMHLL
KKEVKEEEGE HIFIKSNLKK LKIFTAKIKW IEAFGDYVRV VTEDDSNLVL STMKSFENDL
SKDKFIRVHK SYIINIDKVE RFNSKFAEIG ITKIPLSRNK KEDLVKALST S
|
|---|
| |