Gene Fjoh_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3476 
Symbol 
ID5089677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4142821 
End bp4144758 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content33% 
IMG OID644742901 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001195809 
Protein GI146301218 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.41488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TATATATCCT GAGTTTAGTC TTGAGCATTA CGTTTAGTTT TGCTCAAAAG 
ACTAATTTAA AACAAGCCGA TGCATTGTTT AGAAATTATT CATATGCCGA TGCTTCAAAA
GCCTATGAAG AAATTTTGCA GAACATCAAA AATCCTACGG CTCAAACTTT AAAAAATGCA
GCCGATTCGT ATTACTTTAT TTCAGATGCA CGAAATGCAC TTAAATGGTA TAAAAAACTA
TACGAAGTTC AGGGAAATAA TTTAACCGAT ATTTACTATC TGCGTTATAT TCAATCTATG
AAAGCAGTTA TGGATTATGA TGAAGCAGAT AGAGTTACAA AAGAATATCT CGATAAAAAA
GGTGATAAAA AAGAAATCAG CCGTTATGTT GCCCAAAAGA AACAACTGGA CAGTTTAGCA
AAAGCAAAGT CGCTTTATCA GATTAAAAAC CTGGATATTA ATACCAGTAA ATCTGATTTT
GGAGCAACAT TTTTTGGAGA TAAAATCGTT TTTACATCAG CAAGAGATAC TACCAAATTT
AGTGAAAAAC TCTATACATG GAACAATCAG CCTTTTTTGA ATTTATATGT TTCAGAAAGA
AATCCGGCCG ATGGAAGTTT GTTTAACGAA AAACTTTTTC TTCCAAATGT CATGAGCAAA
TATCACGAAG CTACGGCAAG TTTCGATCCA AGCGGAAAAA CCATTTATTA TTCGACAAAC
ATTGTAAAGA AAAATAAATT GGTAGTCGAT GGAGATAAAG TCAACAATTT TCAAATTGTA
AAAGGCACAA TTGTGGATAA TAAACTAGAA AATCCTCAAA ATGTTTTCTT TGACAATGAC
GATTATTCAG TTGGACATCC TTGTTTAAGC GAAGACGGAC AATGGCTTTT CTTTGCATCA
GATATGCCGG GAGGTTTTGG TGAAACCGAT TTGTATGTGG TAAAAATTGC TGCTGACGGA
ACAATGAGTT CTCCATTAAA TTTAGGACCA AATATCAATA CAATGGGAAA TGAGGTTTTT
CCTTATTACA GAAATGGAAT GCTTTATTTT TCTTCAGACG GACATTATGG TTTAGGTGAT
TTAGATGTTT ACGAAAGCAA ATTTTTAGCC GATGGAAATT TTACAACACC TAGAAATCTT
GGAGCACCAA TAAACAGTAA CAAAGACGAT TTTACTTATG TTGTTGATAA AGCAGATACT
TATGGTTATG TTTCATCAAA TAGAGCAGGA GGAAAAGGAG ATGATGATAT TTATTCATTT
GTAAAAGGTA AACCCGTTTG CAACCAAAGT ATTTCAGGGA TTGCAGTTGA CAGAAAAACG
AAACTTCCGT TAACAGATGT TACCATTATG GCTTACAACT CGTTTAAAGA AGTACTTGGA
GAAACAAAAA CCAATTACGA AGGAAAGTAT GCAATTGTTG TTCCATGTAA TAAAGTTGTA
AATATGATTG CAGCAAAGCC AAATTATAGC AGCGACGAAA AAACTGTAGA AACGACAAAA
GAAAACGAAG GCGAAATAAA AGATGTCAAC TTCGAGCTAA GCAACTACGA CGATTTGGTA
GTTAAAAAGA GAGGTGTAGA AATGGTAGAT GTTCAGCCTA TTTATTTTGA TTACGACAAA
TACGATATAA CGCCAAAAGC TATTGAAGAA TTAACCAAAG TCGTTTTTAT CATGCAGAAA
TTTCCAAACA TTAAAATTAA AATAGAATCA CATACAGATT CTCGAGGAAA AGATTCCTAT
AACTTAAAAC TTTCAGACAA CAGAGCCAAG TCAACAAGAG ATTATATTCT CTCACAAGGC
ATTGATGCTT CAAGAATTGA AAGTGCCATT GGTTACGGTG AAAGCCGATT AATCAATAAA
TGTAAAAACG GAGTGAAATG TACTGAAGAA GAACATTTAT TAAACAGACG CTCTGACTTT
ATCATTATTC AAAAATAG
 
Protein sequence
MKKLYILSLV LSITFSFAQK TNLKQADALF RNYSYADASK AYEEILQNIK NPTAQTLKNA 
ADSYYFISDA RNALKWYKKL YEVQGNNLTD IYYLRYIQSM KAVMDYDEAD RVTKEYLDKK
GDKKEISRYV AQKKQLDSLA KAKSLYQIKN LDINTSKSDF GATFFGDKIV FTSARDTTKF
SEKLYTWNNQ PFLNLYVSER NPADGSLFNE KLFLPNVMSK YHEATASFDP SGKTIYYSTN
IVKKNKLVVD GDKVNNFQIV KGTIVDNKLE NPQNVFFDND DYSVGHPCLS EDGQWLFFAS
DMPGGFGETD LYVVKIAADG TMSSPLNLGP NINTMGNEVF PYYRNGMLYF SSDGHYGLGD
LDVYESKFLA DGNFTTPRNL GAPINSNKDD FTYVVDKADT YGYVSSNRAG GKGDDDIYSF
VKGKPVCNQS ISGIAVDRKT KLPLTDVTIM AYNSFKEVLG ETKTNYEGKY AIVVPCNKVV
NMIAAKPNYS SDEKTVETTK ENEGEIKDVN FELSNYDDLV VKKRGVEMVD VQPIYFDYDK
YDITPKAIEE LTKVVFIMQK FPNIKIKIES HTDSRGKDSY NLKLSDNRAK STRDYILSQG
IDASRIESAI GYGESRLINK CKNGVKCTEE EHLLNRRSDF IIIQK