| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3465 |
|---|
| Symbol | |
|---|
| ID | 5089666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4131553 |
|---|
| End bp | 4133205 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644742890 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_001195798 |
|---|
| Protein GI | 146301207 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.393637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACTT CACTGTCAAT TAAAAATTAT GCGCTGATTG AAAAACTTTC TATCGATTTT
TCAAAAGGAT TTTCTATAAT TACAGGTGAA ACAGGAGCGG GGAAATCTAT TATTTTAGGT
GCAATCGGGC TTGTTTTAGG AAAAAGAGCC GACCTGACTT CATTAAAAAA TAAAGAAGAA
AAATGTGTTA TCGAAGCGCA GTTTGAAATT TCAAAATACA ATTTAAAAGA GTTTTTTGAA
GCAAATGACC TCGATTATGA AGACGAAACC ATAATCAGAC GTGAAATTCT GCCTTCAGGA
AAATCTCGTG CCTTTATAAA CGACAGCCCT GTTAATCTTC AGGAGCTGCA GGATTTAAGC
TTGTTTTTAA TCGATATTCA TTCGCAGCAG CAAACACAGG AATTATCAGA CGAAACAGTT
CAGTTTAAGA TAATTGATGC TATTGCAAAT AATAACGATA TCATCTTGTC TTATCAGGAT
TTATTAAAAA GCTATAAATC AGAAAAATCA AAACTGAATG CTTTGTTGAA AAAACAAAGT
GATTCTGGGA AAGAGCAGGA GTACAATACA TTTTTATTAA ATGAATTGGT TTCGGCTAAA
TTAAAATCTG GAGAACAGGC AGAATTAGAA GCTGATTTTG AAAAACTAAA TAATGTCGAA
ATCATTAAAG AATCAATTGA TAAATCGCTT GTAATTGCAA ACGAAGAGCA GTTTGGAGTA
TTTCATAATC TAAATGAAAT TAAGACGGCT TTGCAAAAGA TTGCACCATT TTCTACTGAA
TATCAAAGTT TATTTGATAG AATAACCAGC ATATCAATCG AATTTGATGA TGTTTCAAAA
GAACTGCAAA ATGCTTCAGA AAAATTGCTA AACGATCCGG AGCAATTACA ATTAGTAAGT
CAAAAACTGC AGTTGATTTT CAATTTACAG AAAAAACACC ACGCTGGATC TGTAGAAGAA
CTGCTTCAAA TTCAGGCAGA TTTAGGAAAC ACGCTTCTTG AATTAGATAA TATCGAGGAA
GAAATCGAAA CATTATCAAA AGCAATTGAA GAAAAAGCGG GTGAATTAGA TGCTTTTGCT
GCTAAAATTC ATCAAAATAG AATAAATGCC ATTCCGGTTT TATCAAATCA GTTAATTTCG
ATTTTAGAAA CCTTAGGAAT GCCAAACGTT CGTTTTAATA TCGAACTTAT ACCATCTGAA
ACCTATTTCC AAAATGGAAA AGATGAATTA CAATTCTTGT TTTCGGCTAA TAAAGGAACT
GATTTTGGTC TGCTGAAAAA AGTAGCATCA GGAGGAGAGA TGTCTCGTAT TATGCTGGCT
GTAAAAGCGA TTTTAGCTCA ATATTCAAAA CTGCCTACTT TAATTTTTGA TGAAATTGAT
ACAGGAGTTT CTGGAGAAAT TGCCATTAGA ATGGGAGAGA TCATGAAAGA GATGAGTGCT
AAAATGCAGA TTTTTGCCAT CACACACTTA CCGCAAATTG CAGCAAAAGG CGATTCGCAT
TTCAAAGTTT CAAAAGCAAC AATAGATGAT GATACACAGT CAGAATTGAA GCTGTTGTCT
CAGAATGAAA GAGTTATAGA AATTGCTCAA ATGTTATCCG GAGCAGTCGT TTCTGATTCG
GCTTTAAATC ACGCTAAAGC CTTGTTGAAC TAA
|
|---|
| Protein sequence | MITSLSIKNY ALIEKLSIDF SKGFSIITGE TGAGKSIILG AIGLVLGKRA DLTSLKNKEE
KCVIEAQFEI SKYNLKEFFE ANDLDYEDET IIRREILPSG KSRAFINDSP VNLQELQDLS
LFLIDIHSQQ QTQELSDETV QFKIIDAIAN NNDIILSYQD LLKSYKSEKS KLNALLKKQS
DSGKEQEYNT FLLNELVSAK LKSGEQAELE ADFEKLNNVE IIKESIDKSL VIANEEQFGV
FHNLNEIKTA LQKIAPFSTE YQSLFDRITS ISIEFDDVSK ELQNASEKLL NDPEQLQLVS
QKLQLIFNLQ KKHHAGSVEE LLQIQADLGN TLLELDNIEE EIETLSKAIE EKAGELDAFA
AKIHQNRINA IPVLSNQLIS ILETLGMPNV RFNIELIPSE TYFQNGKDEL QFLFSANKGT
DFGLLKKVAS GGEMSRIMLA VKAILAQYSK LPTLIFDEID TGVSGEIAIR MGEIMKEMSA
KMQIFAITHL PQIAAKGDSH FKVSKATIDD DTQSELKLLS QNERVIEIAQ MLSGAVVSDS
ALNHAKALLN
|
|---|
| |