Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3445 |
Symbol | |
ID | 5089646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4112258 |
End bp | 4113265 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644742870 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001195778 |
Protein GI | 146301187 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATCAC TTTTAAAAAA TGCAAGAGAA CAAAAAGGGT TAAAAACTAG AGAATTGGCT CAGCTTGCCG GAATCGATCA GGCATTAATC AGTAAATTTG AATCTGGAAC ACGAAAACCA ACCAAAGATC AGGTTATTAA ATTATCTCAG CTTTTAGAAA TTGATTATGA AACTTTAATG GTTACCTGGC TTAAAGAAAA GATACTTTAT GAAATTGGTG ATGAAGAACT TGTACTGAAA GCTTTAATTT TAGCTGAACA AGAAATTCAA AACAACAAAA AAGAAATCAA TTCTGCTTTA GTATCTTCTA TTCAAAATAT TTTAGATGAA ATTGAAATCT TAAAAAATAA AATCCACTCC TTTAATCATT TTGAGCTCCG TCAGATTTCA AAAACTTTAG AATTAGAGTT TGTTTTTAAA AGTATTCATT TAAATAAAAA TCCACTAACA CTGGAAGAAA CCAAATTGGT TATAAATGAT GGACTAACTA TTTCCGAAAA AAGCATGCAA AATCATCTTG AAGCCATTAA TTTTCAAGAA GCAGTGTTTT ACATTAAAGA CTTAACTCAA AAGAAAACAT CTTTAAATGA AAAAGATTTT CTTTTGCTTC ATAATTTAAT CTTCAAAGGA TTTGAATCTG AAAATTCTGG AAAATATATA AATGATCCAG TTATTACACG CGAAATGAAT TTATTTTTCA ATTGGCATGA ATCACAAAAA AACAATCTTC ATCCAATAAT TCTTGCATCT GAAGCGCATT TAAAAATACT TGAAATCAAG CCTTTTGAGA ATGGAAATCT ACAAATGGCA AATTTAGCAT TAAACTGGAT TTTAACGCAA TACAATTACA CATACGCCAC AATAGAAGAA GACCAAAAGA GCATCGATGA ATATTTTTCT ATTTTGGAGA AAAGCCAAAC CCAGAATGAT ACATCAATTT TTATTAATTA TATCACTAGA ATTGAAAAAG AAAATCTAAA AAGAGCAATA CAATTAGTCG AAAAATAA
|
Protein sequence | MRSLLKNARE QKGLKTRELA QLAGIDQALI SKFESGTRKP TKDQVIKLSQ LLEIDYETLM VTWLKEKILY EIGDEELVLK ALILAEQEIQ NNKKEINSAL VSSIQNILDE IEILKNKIHS FNHFELRQIS KTLELEFVFK SIHLNKNPLT LEETKLVIND GLTISEKSMQ NHLEAINFQE AVFYIKDLTQ KKTSLNEKDF LLLHNLIFKG FESENSGKYI NDPVITREMN LFFNWHESQK NNLHPIILAS EAHLKILEIK PFENGNLQMA NLALNWILTQ YNYTYATIEE DQKSIDEYFS ILEKSQTQND TSIFINYITR IEKENLKRAI QLVEK
|
| |