Gene Fjoh_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3413 
Symbol 
ID5093661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4077741 
End bp4078781 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content36% 
IMG OID644742838 
Productagmatine deiminase 
Protein accessionYP_001195746 
Protein GI146301155 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.866063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAA ATAATAGAAG ATTTCCAGCA GAATGGGAAA AACAGCAAGG AATTGTATTG 
TGTTTTCCGC ATAATGGCAA TGACTGGCCG GGAAAATACG AAGCTGTTCA ATGGGCTTTT
GTAGAATTTA TTAAAAAAGT AGCCGCTTTT GAAACTGTTT TTTTGGTCGT AGCCGATGAA
AAGCTGAAAG AAAAAGTTGC AGATATGCTT GAAAGAGCCC GCGTAAACCT TAAAAACGTT
TCGTATATCA TTCATAAAAC CAACAGAAGC TGGATGCGCG ACTCTGGGCC GATTATTGTA
AAAAATGGTT CAAAAAGAGA AGCGTTAAAT TTTAACTTCA ACGGCTGGGC AAAATATAAA
AACTATCAAT TAGATAAATT TGTTCCGGGT AAAGTGGCTG ATTTTATCGA TGTGCCTTTA
ACTCAGGTAA TGTATAAAGG TAAACCGGTA ATTGTAGAAG GCGGTGCGAT TGATGTAAAC
GGAAAAGGAA CTTTACTGAC TTCTGAAGAG TGTTTAATGC ACCCAACAAT TCAGGTACGT
AATGCCGGTT TTACAAAAGA AGATTATGAA GCAGTTTTTA AAGAATATCT TGGAGTAACC
AATGTAATTT GGTTAGGAGA TGGAATTGAA GGTGATGATA CGCACGGTCA CATCGACGAT
TTATGCCGAT TTGTAAATGA AGATACCATC GTAACGATTG TTGAAACAGA TAAAAATGAT
TCAAATTATA AGCCTTTGCA GGATAATTTG AAACGTTTGC AGAATGCAAA ATTAGAAAAC
GGAAAATCTC CGGTTATTGT AGCATTACCA ATGCCAAAAC GTGTCGATTT TGAAGATTTA
CGTTTACCGG CAAGTTATGC TAATTTCTTA ATTTTAAATA ATTGTGTTTT AGTACCAACA
TTTAATGACA GCAACGATCG CGCAGCTTTA AATATTTTAG CTGAATGTTT CCCAGATCGT
GAAGTAATCG GAATAAGCTG TATTGATTTT ATATGGGGAT TTGGAACTTT ACATTGTTTA
AGTCAGCAGA TTCCTGCATA A
 
Protein sequence
MSTNNRRFPA EWEKQQGIVL CFPHNGNDWP GKYEAVQWAF VEFIKKVAAF ETVFLVVADE 
KLKEKVADML ERARVNLKNV SYIIHKTNRS WMRDSGPIIV KNGSKREALN FNFNGWAKYK
NYQLDKFVPG KVADFIDVPL TQVMYKGKPV IVEGGAIDVN GKGTLLTSEE CLMHPTIQVR
NAGFTKEDYE AVFKEYLGVT NVIWLGDGIE GDDTHGHIDD LCRFVNEDTI VTIVETDKND
SNYKPLQDNL KRLQNAKLEN GKSPVIVALP MPKRVDFEDL RLPASYANFL ILNNCVLVPT
FNDSNDRAAL NILAECFPDR EVIGISCIDF IWGFGTLHCL SQQIPA