Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3403 |
Symbol | |
ID | 5093651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4066772 |
End bp | 4068181 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644742828 |
Product | aspartate ammonia-lyase |
Protein accession | YP_001195736 |
Protein GI | 146301145 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00437169 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCAA CAAGAAAGGA ACATGATTTT TTAGGAGAAT TAGAAATTCC AAATCATTTA TACTACGGAA TCCAAACTTT TAGAGCGGTA GAAAATTTTA ATATTACAGG AATTCCTATT TCAAAAGAGC CTTTATTTAT CAAAGCTTTA GGATATGTAA AAAAAGCGGC AGCTTTAGCA AATAAAGACT GCGGCGCAAT CGATTCGAAA CTTGCAGAAG CCATTTGTTA TGGAAGCGAC CAGGTAATTT CGGGTAAATT TGATAAGGAA TTTGTCAGTG ATTTAATTCA GGGCGGAGCA GGAACTTCTG TAAACATGAA TGCTAATGAA GTAATTGCCA ATATCGGACT GGAATATTTA GGTCATAAAA AAGGCGAATA TAATTTTCTG CATCCCAATA ATCATGTAAA CTGTTCGCAG TCTACAAATG ATGCTTATCC ATCGGCATTT AGAATTGCTT TATATCTTAA AATGGAAAGC TTCATTAAAA CTTTAGCTGG TTTAGAAGTT GCTTTCGCTA AAAAAGGAGA GGAGTTTAAA GAAGTCCTGA AAATGGGAAG AACGCAGCTT CAGGACGCGG TGCCAATGAC TTTAGGGCAA GAATTTAAAG CCTATGCGAC AACAATTGGC GAAGATATTC AGCGTTTAAA AAATGCTCAG GAATTATTGT TGGAAATCAA TATGGGAGCA ACAGCCATTG GAACAAAAGT AAATGCTCCG GAAGGTTATC CGGAAATTTG TGTTTCTTAT TTAGCCAAAG AAGTTGGAAT TCCGTTAACA CTATCACCAG ATTTAATTGA AGCAACAGTT GATACAGGCG CTTATGTGCA GATTATGGGA ACTTTAAAAC GTTCTGCGGT TAAAATATCT AAAATCTGCA ACGATTTACG ATTACTAAGT TCAGGCCCAA GAACAGGTTT TAATGAAATC AATCTTCCGG CACGCCAGCC GGGATCGTCT ATTATGCCTG GAAAAGTAAA TCCGGTAATT CCAGAAGTAG TAAACCAGAC TTGTTTTTAT GTAATAGGTC AGGATTTAAC AGTTACAATG GCAGCAGAAG CAGGACAATT GCAATTGAAT GTAATGGAAC CTGTAATTGC TTTTGCAATG TTTACTTCGC TGGATTATCT TTCAAATGCT ATTCAGACTT TAATCGATAA ATGTATTAAC GGAATCACCG CAAATGTAGA TCACTGCTAC AATATGGTTA TGAACAGTAT TGGAATTGTA ACACAGTTAA ACCCAATTAT TGGTTATGAA GAAAGCGCCA GTATCGCAGG TGAAGCTTTA AAAACAAACA AAAGTGTTCA TCAAATAGCT GTTGTAGAAA GAAAACTTAT TACACAGGAA AAATGGGATG AAATTTATTC TTTAGAAAAT TTAATTCATC CAAAATTTAT AACAAAATAA
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Protein sequence | MEPTRKEHDF LGELEIPNHL YYGIQTFRAV ENFNITGIPI SKEPLFIKAL GYVKKAAALA NKDCGAIDSK LAEAICYGSD QVISGKFDKE FVSDLIQGGA GTSVNMNANE VIANIGLEYL GHKKGEYNFL HPNNHVNCSQ STNDAYPSAF RIALYLKMES FIKTLAGLEV AFAKKGEEFK EVLKMGRTQL QDAVPMTLGQ EFKAYATTIG EDIQRLKNAQ ELLLEINMGA TAIGTKVNAP EGYPEICVSY LAKEVGIPLT LSPDLIEATV DTGAYVQIMG TLKRSAVKIS KICNDLRLLS SGPRTGFNEI NLPARQPGSS IMPGKVNPVI PEVVNQTCFY VIGQDLTVTM AAEAGQLQLN VMEPVIAFAM FTSLDYLSNA IQTLIDKCIN GITANVDHCY NMVMNSIGIV TQLNPIIGYE ESASIAGEAL KTNKSVHQIA VVERKLITQE KWDEIYSLEN LIHPKFITK
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