Gene Fjoh_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3399 
Symbol 
ID5093647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4062366 
End bp4063769 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content33% 
IMG OID644742824 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001195732 
Protein GI146301141 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.392357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTA GAAAAAAAAT TACTTTTACT TATGTAGCAC TTTCTACCTT TAGTACCTTG 
CTATTGAGTA TTATAGTATT CGTTTTATTT AGAGAAAATA ACCGTTATCA TTTCTTGAAA
AGACTGGAAG ACCGCGCAAA AATTGTGGCT TCTATCCATT TTCAGCATGA TCCCGAAAAA
ATCAAATATT ACAGCAACTT AAAGAAAAAC GGGCTTGAGG AACTTATTGA AGAAGAAGAA
TATGTTCTTA AAATAAACAG TGCCAATAGT TTCGATTATA ATACTAAACT AAATCTTCCA
AATAAGTTTT ATTCTAATAT CCTTGCAACC GGAGAAGATT ATTTTGAAGT CAACAGCAAA
TATTATCTTG GACAGGTTTT TACAGAAAGA GACCAAAAAT ATATTGTAAT TGTTGGCGCG
CGCGACCGCA GAGGAAAAAC TACAACCGTT TATATTGTCA AAATATTGCT TTTTGGCGGT
ATTGGTTTTA TACTTCTGGC TTTCTTTTTA GGTCGTTTTC TGGCTAAAAG GGTTATAAAT
CCTGTAGCTA GAATAACAAA AGAAGTAAAC AGAATCAGTG CTTCAAATCT TCATAACCGA
TTGCCGGCCG TTAAAAACTC TGATGAAATT TCAGATTTAA CAGAAACCTT CAACGATATG
CTTGACAGGC TTGAAACATC ATTTGAAATT CAGGCCAATT TTATCAATAA TGCTTCACAC
GAATTAAAAA CGCCAATTAC TACGATTATT GCCGAGGCAG AAATTATGCT TCTAAAAGAA
CGTGAAGTAG CAGAATATAT AGAATCATTA CAAAACATAT ACGGACAGGC TTCAAGATTA
GGAAACCTCA CTGAAAGTTT ATTAAAATTG ACTCAAACGG GGTACGATGG AAATAAACAG
GTTTTGGACA TTGCCAGAAT CGATGAATTA CTATTGGATG TAAAATCTGA TTTAGATAAA
ATTTTCCCGG ATAACCGTGT GAGTATTAAA ATGAATTTTG CACCAAAAGA TTCTAATTTA
CTTTTAATTC CCTGCAATAA ACCGCTTTTA GAACTGGCGA TTAATAATAT TATAACCAAC
GGCGTTAAAT ATTCAGACAA TAATGAAGTA TTTGTAACGC TTTCGGCAAA CCTGGATGCG
ATTAAAATTT CGATTAATGA TATCGGGATC GGAATTCCGC CAGAAGATAT TCCGCATTTG
TATGAACCTT TCTTTAGAGG GAAAATTGCG GCAAAATATA TAGGTTATGG TTTAGGTCTT
CCATTGGCTT CAAAAATCAT TCGCATGCAC GACGGAGAAA TACAAGTACA ATCAGAACAA
AATAAAGGTA CGATTGTAAC CATCATCTTT AAAAAAACAA ATCCGAAAAA GAACAACATT
AAAAATTCTA ATGTTGAATC TTAG
 
Protein sequence
MDIRKKITFT YVALSTFSTL LLSIIVFVLF RENNRYHFLK RLEDRAKIVA SIHFQHDPEK 
IKYYSNLKKN GLEELIEEEE YVLKINSANS FDYNTKLNLP NKFYSNILAT GEDYFEVNSK
YYLGQVFTER DQKYIVIVGA RDRRGKTTTV YIVKILLFGG IGFILLAFFL GRFLAKRVIN
PVARITKEVN RISASNLHNR LPAVKNSDEI SDLTETFNDM LDRLETSFEI QANFINNASH
ELKTPITTII AEAEIMLLKE REVAEYIESL QNIYGQASRL GNLTESLLKL TQTGYDGNKQ
VLDIARIDEL LLDVKSDLDK IFPDNRVSIK MNFAPKDSNL LLIPCNKPLL ELAINNIITN
GVKYSDNNEV FVTLSANLDA IKISINDIGI GIPPEDIPHL YEPFFRGKIA AKYIGYGLGL
PLASKIIRMH DGEIQVQSEQ NKGTIVTIIF KKTNPKKNNI KNSNVES