| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3396 |
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| Symbol | |
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| ID | 5093644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 4058877 |
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| End bp | 4060298 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644742821 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001195729 |
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| Protein GI | 146301138 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.644089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAACT CAAATTACTT ATATCTACAG TTTGCAGACG TGATTGAAAA ACAAATAAAA
TCAGGTCTTT TAAATGTTGG CGATAAACTG CCGTCGATAA GAGAAGTCTG TGCAGAAACG
GGTTATAGTA TGAGTACAGT AAGCAAGGCT TATTATGAAG TCGAAAGCCG TTCGCTGATT
GAATCGCGCC CGCAGTCTGG TTATTATGTG AGTAATATTT CGGCACGAAT CATTTCAGAA
CCTTCTGCCA GCACACCAAT TTTAAGCGTC GAAAATATTG AACGCGAAGA TTTAGTAGAT
TTGGTTTACG GCGATATGCG CAAAAAAGAC TTAACGATGC TTTCGCTTGG CTTTCCTTCA
AATGAACTGT TACCAATAGC AAAGCTGAAT AAAGGAATGG TTCAGGCAAT GCGCCAATTA
CCAAACAGCG GCACGAGTTA TGAGGAAATT CAGGGAAACA GTAATTTAAG AAAAGAGATT
GCGCGCTGGT CTTTTACATG GGGAGGTTCC TTGACTGAAG AAGATATTAT TACAACTCCA
GGCTGTATTT CGGCTATTTC AGATTGTTTA TTGGCTTTGA CAAAACCGGG AGACACAATT
ATTACCGAAA GTCCGGTATA TTTTGGAATT CTGCAATTAG CCAGATCTTT AGGTTTGTAT
GTAATGGAAC TTCCTACTAA TATGACAACG GGAATTGAAC TTGAAGCTGT TAAAAAAACA
CTTTCGGCAA ACAAAGTTAA AGCTTGTGTT TTGATGAGCA ATTTCAGCAA TCCGTCTGGA
AGTATGATGC CGAATGAACA CAAAAAAGAG ATTGTCCGCT TGATGGATTT CTATAATGTT
CCGTTAATTG AAGATGATAT TCACGGCGAT TTATATTTTG GCTCAAGCCG ACCGACTAAC
TGTAAAACCT ATGACGAAAG TGGTATTGTA CTTTGCTGCA GTTCGGTTTC TAAAACTCTG
GCACCGGGTT ATCGTGTTGG ATGGGTTTCT CCGGGAAAAT TTAAAAAAGA AATTCTGAGA
GCAAAATTAT ATCATACGAT CTCCTCTCCT ACTATTACGC ATGAAGTGGT AGGCGATTTT
TTAAAAAACG GACGTTATGA AAATCATCTT CGCAAAATTC GCCAAATCCT GAACCGAAAC
TGCAATAATT ACATCAATAC AGTTTTAGAA TCATTTCCGG CTGGTACAAA AGTAAGCCAG
CCTCAAGGCG GATTTTTCCT TTGGGTTGAA CTGGATAAAA AAATCGACAC TTCTGCTTTT
TATCATTTGG CATTAAAACA TAATATAAGC ATTGCACCGG GAAGAATTTT TTCTTTTCAG
GATCAATTCT CAAATTGTAT GCGTTTGAGT TTTGGACTTC CGTGGACGAA TGAACTGCGT
GAGTCTATTC GAACTTTAGG AAGACTGGCA AAAAGTATTT AG
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| Protein sequence | MGNSNYLYLQ FADVIEKQIK SGLLNVGDKL PSIREVCAET GYSMSTVSKA YYEVESRSLI
ESRPQSGYYV SNISARIISE PSASTPILSV ENIEREDLVD LVYGDMRKKD LTMLSLGFPS
NELLPIAKLN KGMVQAMRQL PNSGTSYEEI QGNSNLRKEI ARWSFTWGGS LTEEDIITTP
GCISAISDCL LALTKPGDTI ITESPVYFGI LQLARSLGLY VMELPTNMTT GIELEAVKKT
LSANKVKACV LMSNFSNPSG SMMPNEHKKE IVRLMDFYNV PLIEDDIHGD LYFGSSRPTN
CKTYDESGIV LCCSSVSKTL APGYRVGWVS PGKFKKEILR AKLYHTISSP TITHEVVGDF
LKNGRYENHL RKIRQILNRN CNNYINTVLE SFPAGTKVSQ PQGGFFLWVE LDKKIDTSAF
YHLALKHNIS IAPGRIFSFQ DQFSNCMRLS FGLPWTNELR ESIRTLGRLA KSI
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