Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3378 |
Symbol | |
ID | 5092984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4036124 |
End bp | 4039078 |
Gene Length | 2955 bp |
Protein Length | 984 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644742803 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001195711 |
Protein GI | 146301120 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCTAA ATTTTTTGAA GTCCGTTTTT AGAAGGGGTA TAGGAAGTTA TTGTGCAGTT TTTGATAAAA TACTATTAAA ACAAACCAGT TTAATACTCT ATTTTTATCG TTCTAACTTA CCTAACCCTG TTTTTATGAA AATTTTTTAC GTAAAAAGAA TTTTTCTGTG TATCCTATTT TTGGTTTCCG TTCTGGCTTT GGCCCAAAAC AAATCAGAAA GGGAATTGAT ATTGATTGAT AACGACTGGC GTTTTTCATT TGGTCATTTA TATGATACAG AAAAAGATTT TAAACATGCA GAAGGCTATT TTTCATATTT AACCAAAACC GGATTTGGCG ACGGCCCGGC GGCAAAAGAT TTTGATGACC GCGCGTGGCG AAAATTAGAT CTGCCTCACG ATTGGGCTGT TGAACAAGAG TTTAGTGAAA GCGGCAGTTT CAGCCACGGA TTTAAAACGT CTGGAAAAGG TTTTCCGGAG AAAAGCATTG GTTGGTACCG AAAAAAAATC ACTATTCCTG AAACCGATAA GGGCAAAATT ATTTCAATAA AATTTGATGG TGTTTTTAGA AATTCGAAAG TTTTTTTTAA CGGCTATTAT CTGGGAACAG AACAAAGCGG ATACAATGGT TTTGAATATG ATGTATCAGC TTATGTAAAT TATGGAGGCG AAAATACGAT TGTAGTTCGT GCCGATGCTT CGATGGAAGA AGGCTGGTTT TATGAAGGAG CCGGAATTTA CAGACATGTT TATCTGCAGA AAACAAACCC AATTCATGTT GCCGCAAACG GAACTTATAT AACCTCAGAA ATTACAAATA CTACTGCCGA AATAACTGCC GAAGTTTCTA TTGAAAACAA AGGAAATTAT AAAGGTTCTG TTGAAATTAT TCAGACTGTT TTTGATGCTT CAAACCAACA GATTGCAGGT GTATCTGAAA ATGTAAATGC TCCGGAATTT TATAAAACAG ACAAGTATAC TTCAAAATTA CAAGTAAATA ACCCGCTTTT GTGGGATATT GATTCTCCAA ATCTGTATCG TTTAGTAACT CAGATTAAGC AAAACGAAAA AATAATCGAC AATTATGAAA CGTCTTTTGG AATCAGAACC ATTAAGTTTG ATTCGGAAAA AGGATTTTTT TTAAACGGAA AACCTGTAAA ATTAAAAGGA ACCAACAATC ATCAGGATCA TGCGGGAATT GGAACAGCGC TTCCAGATGA AATTCAGTAT TACCGAATTA AAAAGTTAAA AGAAATGGGT TCGAATGCGT ATCGCTGTTC GCATCATCCG CCAACACCAG AACTGCTGAA AGCTTGTGAT GAACTTGGAA TGCTGGTAAT TAATGAAACA CGTTTAATGG GAATTAACGA CTATCATTTG AATGATTTAA AACGAATGAT GGAGCGCGAC CGAAACCATC CGAGTATTTT TTGCTGGTCG GTTGGAAATG AAGAATGGAA TATTGAAGGC AATATTGTGG GCGAACGCGT GACGAATGTA ATGCAGGATT TTGCAAAAAG CATCGATCCG ACAAGACCTG TAACTGTTGG AATCAGCAGC GGATTTAAAA GCGGCATTTC GTCTGTAGTA GAAATCATGG GGTATAATTA TCTTGGTAAC GGCGATATTG ATGCGCATAG AAATCAGTTT AAAAACCAAC CCGGAATGGG AACTGAAGAA GGTTCGACTT TTGCAACACG CGGTATTTAT TTTACAGATG ATGCCAAACA TTACCAAAGT GCTTATGATC GCAAACCGCG TCCCACTTTT TACAGTATTG AAGAAGGCTG GAAGTTTTAT GCCGAAAGAC CGTATCTGGC CGGAATGTTT ATTTGGACAG GTTTTGATTA TCGCGGAGAA CCAACTCCGT ATGGCTGGCC TTCGGTAACT TCATATTTCG GAATGATGGA TGTATGCGGT TTCCCAAAAG ACAATGTGTT TTATTTAAAA TCGTGGTGGG GAACGCAGCC AGTTCTGCAT ATTATGCCGC ACTGGAACTG GAGCGGCATG GAAGGAAAAG AAATGGATGT ATGGGTGCAT TCGAATTGCG ATGAAGTACA ACTTTTTCTA AATAAGAAAA GTCTCGGCAA GAAGAAAATG GAGCTAAACA GCCATTTAGA ATGGAAAGTA AAATATATGC CCGGAACTCT GGAAGCCATT GGATACAAAA ACGGCAAAAA AGTATTAACA GAAATCCAGA AAACGACCGA AAAGGCTCAA AACATAAAAC TATCTATAGA TAAAGAAAAC ATTCCAAATT CTAAAGTTTT GGTTGTAACG GCAGAAGTTA CCGATAAAAA CGGATTGCAT ATTCCAACTT CAAATGAGGA AATTACCTTT TCTATAAAAG GAGGAAAGAT TTTAGGAGTA GGAAACGGCG ACCCGGCTTC TTTAGAAAAA GACCAGTTTA TCGATGCTGT TTCGTTAGTT CAAATAACGA ATTTTCAGGA GCAAAAAGGA TTGACGGCTG ATTTGCCTCA GGAATTTCAA AATTATCCTG AAAATGATTG GAAAACAGCC TTTAGAGACC GTGATTATAA AAATCAGGCA CCGTCTTATG TTTATAAAGG AGAATTTGAC TTAAAAAATA ATTCAGCTTT AAATAAGGTG AGCTTCTTTT ATAAAAAAAT AGGAGTGGAG GCAGTAGTTT TCATCAACGG AAATAAAATA AATCCAAGTT CAGAAGATTC TCAAAAATAT ATTTTAGACT CCAGTATTTT AAAAGAAGGA AAAAACACGA TTCATATTGC AGCAACGCCT TTGCAAAAAA TAAAAGACTG GGACGTGCTG AATATAGATC CCGGAATTAT ACAAGTTATA ACACCCGCAG AATCCTGGAA AAGAAAACTT TTTAATGGTT ATGCGCAAAT CATAATTCAA AAAGAAGAAA GTGCAGATGA AGTTGTTTTA TCGGCTTTCG CCAAAGGATT AAAAACAGGA ATTTTGAAGA AATAG
|
Protein sequence | MILNFLKSVF RRGIGSYCAV FDKILLKQTS LILYFYRSNL PNPVFMKIFY VKRIFLCILF LVSVLALAQN KSERELILID NDWRFSFGHL YDTEKDFKHA EGYFSYLTKT GFGDGPAAKD FDDRAWRKLD LPHDWAVEQE FSESGSFSHG FKTSGKGFPE KSIGWYRKKI TIPETDKGKI ISIKFDGVFR NSKVFFNGYY LGTEQSGYNG FEYDVSAYVN YGGENTIVVR ADASMEEGWF YEGAGIYRHV YLQKTNPIHV AANGTYITSE ITNTTAEITA EVSIENKGNY KGSVEIIQTV FDASNQQIAG VSENVNAPEF YKTDKYTSKL QVNNPLLWDI DSPNLYRLVT QIKQNEKIID NYETSFGIRT IKFDSEKGFF LNGKPVKLKG TNNHQDHAGI GTALPDEIQY YRIKKLKEMG SNAYRCSHHP PTPELLKACD ELGMLVINET RLMGINDYHL NDLKRMMERD RNHPSIFCWS VGNEEWNIEG NIVGERVTNV MQDFAKSIDP TRPVTVGISS GFKSGISSVV EIMGYNYLGN GDIDAHRNQF KNQPGMGTEE GSTFATRGIY FTDDAKHYQS AYDRKPRPTF YSIEEGWKFY AERPYLAGMF IWTGFDYRGE PTPYGWPSVT SYFGMMDVCG FPKDNVFYLK SWWGTQPVLH IMPHWNWSGM EGKEMDVWVH SNCDEVQLFL NKKSLGKKKM ELNSHLEWKV KYMPGTLEAI GYKNGKKVLT EIQKTTEKAQ NIKLSIDKEN IPNSKVLVVT AEVTDKNGLH IPTSNEEITF SIKGGKILGV GNGDPASLEK DQFIDAVSLV QITNFQEQKG LTADLPQEFQ NYPENDWKTA FRDRDYKNQA PSYVYKGEFD LKNNSALNKV SFFYKKIGVE AVVFINGNKI NPSSEDSQKY ILDSSILKEG KNTIHIAATP LQKIKDWDVL NIDPGIIQVI TPAESWKRKL FNGYAQIIIQ KEESADEVVL SAFAKGLKTG ILKK
|
| |