Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3377 |
Symbol | |
ID | 5092983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4034534 |
End bp | 4036084 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644742802 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001195710 |
Protein GI | 146301119 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCTT TAAACCGTAA CCTGCTCATT ATTACAGTCA TTCTTGCTGC CATTATGGAA CTAATTGATA TTTCTATCGT AAATGTGGCG CTTTCGCACA TGAGCGGTAA TCTGGGTGCA ACTCTCGAAG ATACTTCGTG GGTAATTACT GCTTATGCCA TTGCAAATGT TATTATTATT CCCATAACGA GCTTTTTAAG CGCCAATCTG GGCAGACGCA ATTATTATAT TGGTTCTGTT GTTTTATTTA CATTCTGCTC TTTTATGTGC GGCCACTCGT CTAACATCTG GATGCTGGTC TTTTTTAGAT TTTTTCAGGG AATTGGCGGC GGTGCTTTAT TATCTATCTC ACAGGTTGTT GTATTTGAAC TTTTTCCAAA AGACAAACAA TCAACAGCCG GAGCTTTGTT TGGAGCCGGA ATTTTTATCG GCCCTACAAT TGGGCCGACA CTTGGCGGCT ATATTACTGA AAATTATGAC TGGCCGTGGA TTTTTTTAAT TAATATTCCT ATTGGAATTT TGGTTACGAT TTCTTGTTAT TTCCTTTTAC GCGAACCCAC TGTAAAGCCA GAAATTACCA AAGTCGACTG GACCGGAATT GCGCTTCTCG CTATAGGAGT GGGCGCTTTA CAAACGGTAT TAGAAAGAGG CGAAGTCGAA GACTGGTTCG AAACCAAATA TATTGTTGTA CTAACGATTA TTGCAGTAAC AACTTTACTC GCCTTTATTT ATTGGGAATT AACAATAGAA AAACCAGTCG TAAACCTTCG GGTGATTAAA AGCAAATCGT TAAGCATTGC AGCAATTTTG ACTTTTGTAA CCGGTTTTGG AATGTTTATT TCCATTTATA TAAGTCCGGT TGTGGCACAG CGTTTATTGA GTTTTTCACC GTATCAAACA GGATTACTTT TGCTTCCGGG TGCATTATTT GCTTTACTGG CTTTAAAAAT CTGCGGTACA TTATTACAAA AAGGCGTTTC TCCGGTTATT ATTATTGCTG CTGGATTTCT GTTATTTATC TATTTCAATT GGCGAATGTC TGGTATGACT TTAAACACAA GCGCTGCCGA AGTCGCTACA TCTCTTGTTT TTCGTGCTTT AGGAATGGCG CTGCTTACCG TACCGCTTAC TATGCTGGCT GTTTCTTCAT TAGATGATAA AGATGTTGGG CAAGGTGCTG CGCTTAATAA TATGATGAGA CAATTGGGCG GTTCATTTGG TGTATCGATC ATCAATACTT ATGTGGCTCA TCGATTTGCC GCACATCGAA ATGAATTGAT TTCAGAGGTG ACACCAAGTA ATACTCTCGC TATGGATCGC ATAAATGCTT ACATAAAGTA CTTTCAATAT AGAGGTTTTA CTTATAATGA AGCCAGAGCA AAAGCCTTAA AGCTGATGGA AAATATCGTA ATGAAACAAT CTTCGCTGTT AAGTTACAGA GACGCTTTTT TTCTTGTTGG TTTGTTTTTT GTTGTAACGC TGCCCCTTCT TTTATTTGTA ATGAACAAAT CGAAAAAGCC AAAAACCAAC ATGGTAATTT CCGATCATTA A
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Protein sequence | MTPLNRNLLI ITVILAAIME LIDISIVNVA LSHMSGNLGA TLEDTSWVIT AYAIANVIII PITSFLSANL GRRNYYIGSV VLFTFCSFMC GHSSNIWMLV FFRFFQGIGG GALLSISQVV VFELFPKDKQ STAGALFGAG IFIGPTIGPT LGGYITENYD WPWIFLINIP IGILVTISCY FLLREPTVKP EITKVDWTGI ALLAIGVGAL QTVLERGEVE DWFETKYIVV LTIIAVTTLL AFIYWELTIE KPVVNLRVIK SKSLSIAAIL TFVTGFGMFI SIYISPVVAQ RLLSFSPYQT GLLLLPGALF ALLALKICGT LLQKGVSPVI IIAAGFLLFI YFNWRMSGMT LNTSAAEVAT SLVFRALGMA LLTVPLTMLA VSSLDDKDVG QGAALNNMMR QLGGSFGVSI INTYVAHRFA AHRNELISEV TPSNTLAMDR INAYIKYFQY RGFTYNEARA KALKLMENIV MKQSSLLSYR DAFFLVGLFF VVTLPLLLFV MNKSKKPKTN MVISDH
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