Gene Fjoh_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3377 
Symbol 
ID5092983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4034534 
End bp4036084 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content38% 
IMG OID644742802 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001195710 
Protein GI146301119 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTT TAAACCGTAA CCTGCTCATT ATTACAGTCA TTCTTGCTGC CATTATGGAA 
CTAATTGATA TTTCTATCGT AAATGTGGCG CTTTCGCACA TGAGCGGTAA TCTGGGTGCA
ACTCTCGAAG ATACTTCGTG GGTAATTACT GCTTATGCCA TTGCAAATGT TATTATTATT
CCCATAACGA GCTTTTTAAG CGCCAATCTG GGCAGACGCA ATTATTATAT TGGTTCTGTT
GTTTTATTTA CATTCTGCTC TTTTATGTGC GGCCACTCGT CTAACATCTG GATGCTGGTC
TTTTTTAGAT TTTTTCAGGG AATTGGCGGC GGTGCTTTAT TATCTATCTC ACAGGTTGTT
GTATTTGAAC TTTTTCCAAA AGACAAACAA TCAACAGCCG GAGCTTTGTT TGGAGCCGGA
ATTTTTATCG GCCCTACAAT TGGGCCGACA CTTGGCGGCT ATATTACTGA AAATTATGAC
TGGCCGTGGA TTTTTTTAAT TAATATTCCT ATTGGAATTT TGGTTACGAT TTCTTGTTAT
TTCCTTTTAC GCGAACCCAC TGTAAAGCCA GAAATTACCA AAGTCGACTG GACCGGAATT
GCGCTTCTCG CTATAGGAGT GGGCGCTTTA CAAACGGTAT TAGAAAGAGG CGAAGTCGAA
GACTGGTTCG AAACCAAATA TATTGTTGTA CTAACGATTA TTGCAGTAAC AACTTTACTC
GCCTTTATTT ATTGGGAATT AACAATAGAA AAACCAGTCG TAAACCTTCG GGTGATTAAA
AGCAAATCGT TAAGCATTGC AGCAATTTTG ACTTTTGTAA CCGGTTTTGG AATGTTTATT
TCCATTTATA TAAGTCCGGT TGTGGCACAG CGTTTATTGA GTTTTTCACC GTATCAAACA
GGATTACTTT TGCTTCCGGG TGCATTATTT GCTTTACTGG CTTTAAAAAT CTGCGGTACA
TTATTACAAA AAGGCGTTTC TCCGGTTATT ATTATTGCTG CTGGATTTCT GTTATTTATC
TATTTCAATT GGCGAATGTC TGGTATGACT TTAAACACAA GCGCTGCCGA AGTCGCTACA
TCTCTTGTTT TTCGTGCTTT AGGAATGGCG CTGCTTACCG TACCGCTTAC TATGCTGGCT
GTTTCTTCAT TAGATGATAA AGATGTTGGG CAAGGTGCTG CGCTTAATAA TATGATGAGA
CAATTGGGCG GTTCATTTGG TGTATCGATC ATCAATACTT ATGTGGCTCA TCGATTTGCC
GCACATCGAA ATGAATTGAT TTCAGAGGTG ACACCAAGTA ATACTCTCGC TATGGATCGC
ATAAATGCTT ACATAAAGTA CTTTCAATAT AGAGGTTTTA CTTATAATGA AGCCAGAGCA
AAAGCCTTAA AGCTGATGGA AAATATCGTA ATGAAACAAT CTTCGCTGTT AAGTTACAGA
GACGCTTTTT TTCTTGTTGG TTTGTTTTTT GTTGTAACGC TGCCCCTTCT TTTATTTGTA
ATGAACAAAT CGAAAAAGCC AAAAACCAAC ATGGTAATTT CCGATCATTA A
 
Protein sequence
MTPLNRNLLI ITVILAAIME LIDISIVNVA LSHMSGNLGA TLEDTSWVIT AYAIANVIII 
PITSFLSANL GRRNYYIGSV VLFTFCSFMC GHSSNIWMLV FFRFFQGIGG GALLSISQVV
VFELFPKDKQ STAGALFGAG IFIGPTIGPT LGGYITENYD WPWIFLINIP IGILVTISCY
FLLREPTVKP EITKVDWTGI ALLAIGVGAL QTVLERGEVE DWFETKYIVV LTIIAVTTLL
AFIYWELTIE KPVVNLRVIK SKSLSIAAIL TFVTGFGMFI SIYISPVVAQ RLLSFSPYQT
GLLLLPGALF ALLALKICGT LLQKGVSPVI IIAAGFLLFI YFNWRMSGMT LNTSAAEVAT
SLVFRALGMA LLTVPLTMLA VSSLDDKDVG QGAALNNMMR QLGGSFGVSI INTYVAHRFA
AHRNELISEV TPSNTLAMDR INAYIKYFQY RGFTYNEARA KALKLMENIV MKQSSLLSYR
DAFFLVGLFF VVTLPLLLFV MNKSKKPKTN MVISDH