Gene Fjoh_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3375 
Symbol 
ID5092981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp4033365 
End bp4033955 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content35% 
IMG OID644742800 
ProductTetR family transcriptional regulator 
Protein accessionYP_001195708 
Protein GI146301117 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG CCCAAAGAAC CAAGCAATTT ATAATCGAGA AAACCGCTCC TATCTTTAAT 
ATGAAAGGCT ACAGCGGTAC ATCTATGAGC GATATTACTG AGGCTACCGG ATTAACCAAA 
GGAAGCATTT ACGGTAATTT TGCCAATAAA GATGAAGTAG CATTGGCGGC TTTTCGTTTT 
AATGTCAAAA AACTGCATGA TATTTTTGCA AGAGAAATTG AAAAAGAAAA AACCTTTAAG 
GGCAAACTAT TGGTTTATCC TCGTCTTTAT TCTGATTACT ATGATTTAAG AGTTACACAA 
GGCGGATGCC CAATTATTAA TACCGCTACA GAAGCTGATG ACACACACCC AGTTCTAAAG 
AAAAAAGTAG AACGAGTTAT TTTATCTTGG AAAGAGCAAT TGGTTTATTT TATTGAACAA 
GGAATCCTTT TGGGAGAATT TAAAGCCCAT TCTATCGATC CCGAAAAAAC GGCTTTAACT 
ATTATTGCTA TGATTGAAGG AACTGTTATG ATTGCTAAAA TTACCGGAAA CCTGTCAACT 
CTGGCCGATA TTATGCTTTC TGTCACAAAA ATCATCGAAG ACTTAGTATA A
 
Protein sequence
MSKAQRTKQF IIEKTAPIFN MKGYSGTSMS DITEATGLTK GSIYGNFANK DEVALAAFRF 
NVKKLHDIFA REIEKEKTFK GKLLVYPRLY SDYYDLRVTQ GGCPIINTAT EADDTHPVLK 
KKVERVILSW KEQLVYFIEQ GILLGEFKAH SIDPEKTALT IIAMIEGTVM IAKITGNLST 
LADIMLSVTK IIEDLV