Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3364 |
Symbol | |
ID | 5092970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4024765 |
End bp | 4025496 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644742789 |
Product | formamidopyrimidine-DNA glycolase |
Protein accession | YP_001195697 |
Protein GI | 146301106 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAAG GTCCGTCTAT ATTGATTTTA AAAGAAGAAG TACAGCAGTT TGCAGGTAAA AGGATAATTG AAGTTTCTGG AAACGCCAGT ATTGATCTGG AACGTTTACA AGATAAAACG ATCTTATCTT TTAAAACCTG GGGAAAGCAT TTTTTAATTT GTTTCGATGA TTTTACAATA AGAATTCATT TAATGATGTT TGGAACGTAC AGAATCAACG AAAAAAAAGA AACTGCACCA AGGCTGCATT TGGGATTTTC TAACGGAGAA ATCAACTTTT ATACCTGTTC CATAAAAGTT TTAGAAGGTG CTGTAGATCA ATATTACGAT TGGAGCGAAG ATGTTTTAAA TGAAAACTGG AATCCCAAAA AAGCGAAAAT AAGCCTTGAT AAAATTCCAA ATGAAAAAAT ATGCGATGCG ATTTTAGATC AAAATATATT TTCGGGAGTA GGGAATATTA TTAAAAACGA AGTTTTATAC CGATGTTTTG TTCACCCGGA ATCTTTGGTT GGAAAAATAC CGCCAGAGAA GATCGACGAA CTTATAGCCG AATGTTCGAT TTACAGTTTT GAATTTTTGT ATTGGAAAAA GAAATTTGAA CTCAAAAAAC ACTGGCTTGC ATATTCTCAA AAAGAATGTA AAAGATGCAG TTTACCGATG ATAAAAAAAC CGACAGGGAA GAAAAAACGC CGTAGTTTTT TCTGTACCAA CTGCCAACAA CTTCACTCAT GA
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Protein sequence | MPEGPSILIL KEEVQQFAGK RIIEVSGNAS IDLERLQDKT ILSFKTWGKH FLICFDDFTI RIHLMMFGTY RINEKKETAP RLHLGFSNGE INFYTCSIKV LEGAVDQYYD WSEDVLNENW NPKKAKISLD KIPNEKICDA ILDQNIFSGV GNIIKNEVLY RCFVHPESLV GKIPPEKIDE LIAECSIYSF EFLYWKKKFE LKKHWLAYSQ KECKRCSLPM IKKPTGKKKR RSFFCTNCQQ LHS
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