Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3345 |
Symbol | |
ID | 5092952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4000913 |
End bp | 4002178 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644742772 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001195680 |
Protein GI | 146301089 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TATCTAGTTA TTTAACCGCA AAGAGCGTAA AGATTTTATC GCAAAGCTTA TTTTCTCTGC GTGCCTTGCT CCCGATGGCT ATCGGGATTG CGATCTTTGC GGTTAACTTA ATAAGCTGTA ACCAAAAGAA AGCAGAAGAA CCCCAGAAAG AAGAAAAAGA AACTACAGAA GTGGCTTTAA GCGAATCTCA ATACAAAACT GTAGGAATTG AAACGGGCAT TGTAGAAGAC CGCAATCTTA ATAAAGTGAT CAAAGCAAAT GGTTACACGA CAGTTCCTCC GCAAAATTCA GCTGAGGTTT CGACTCTAAT TGGCGGAACA GTGAAAGACA TTTATGTATT GGAAGGAACA TTCGTTAACA AAGGGAAAGT TTTGGCAACG ATTCAAAATC TTGAAGTTAT TGGCATGCAG GAAGATTACC AGTCGGCGGC TGCCAATGTA GAATATCTGC AATTAGAATA CAACCGCCAG AAAACGCTGA GCGATGAAAA TGTAAATCCA AGAAAGACTT TTCAGGAAGT AAAAGCCAAA TTAGCAGCAG AAAGAGCCCG TGCGCAGGCA GCAAAAAACA AATTAGATGC TTTGCACGTC AACACAAAAG GAACAACATC GGTTGTGCCT ATTGTTTCGC CTATTAGTGG TTTTGTCGGG AAAATCAATA TTGCCAAAGG TGCTTTTGCA AACACAGGAG TTTCGCTTTT TGAAGTAACA GATAACAGCC AGATGCATTT AGATTTAAAT GTGTACGAGA AAGATTTAGG TTCGATTTCT ATTGGTCAGG TGATCGATTT TGTATTAACG AATCAGTCGA ACAAATCGAT TAAAGGAAAG ATTTTCGGAA TCAATAAATC ATTTTCTAAC GAAAGTAAAA CCGTTGCTGT TCATGCGAAA ATCGATCCTG CCGATGCCAA AGGCCTGATT CCTGGAATGT ATGTTTCGGC AAATATTAAT ATTACAAACG CAACAGTCCC GGCATTGCCA AAAGACGCCG TTGTTCGAAA CGCTGATAAA TATTTTGTTT TTGTACAAGA AGAAAGCCAT ACAGAAGAAA AGCACGAGCA TAAAGAAGGA GAAAAAGAAG AAGCTCACGA AAAAGAAATT CATTTTAAAG CCATTGAAGT CGTTCCTGGA ACTACAGATT TAGGTTTTAC AGAAGTTAAG TTCGTTGATA AGATTGACTC TCAGGCAAAA ATTGTTACAA AAGGTGCTTT TTACCTGCTT TCGGCAATGA AAGGCGGAGG AGAGCACGAA CATTGA
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Protein sequence | MKNISSYLTA KSVKILSQSL FSLRALLPMA IGIAIFAVNL ISCNQKKAEE PQKEEKETTE VALSESQYKT VGIETGIVED RNLNKVIKAN GYTTVPPQNS AEVSTLIGGT VKDIYVLEGT FVNKGKVLAT IQNLEVIGMQ EDYQSAAANV EYLQLEYNRQ KTLSDENVNP RKTFQEVKAK LAAERARAQA AKNKLDALHV NTKGTTSVVP IVSPISGFVG KINIAKGAFA NTGVSLFEVT DNSQMHLDLN VYEKDLGSIS IGQVIDFVLT NQSNKSIKGK IFGINKSFSN ESKTVAVHAK IDPADAKGLI PGMYVSANIN ITNATVPALP KDAVVRNADK YFVFVQEESH TEEKHEHKEG EKEEAHEKEI HFKAIEVVPG TTDLGFTEVK FVDKIDSQAK IVTKGAFYLL SAMKGGGEHE H
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