Gene Fjoh_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3342 
Symbol 
ID5092949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3996663 
End bp3997739 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content35% 
IMG OID644742769 
ProductOuter membrane protein/protective antigen OMA87-like protein 
Protein accessionYP_001195677 
Protein GI146301086 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.501978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TGCTTTTATT TTCACTAATG CTTTTTTTAT GGTATTCATG GGGATGGACT 
CAGGAAAAGC AGACTGACAG CACCAAATCA TCTGTTGAAA AGACTAAAAA CATTGATTTT
AATGTAATGC CTTATCTTAA TTACAATAGA ACACTTGATT TTATGTTTGG AGCTATTCCG
ATGATGATGT ACAAGTTTGA TAAAACAGAT ACAATTTCAC CTAAATCCTT ATCTGGTTTG
TCTGCTGTTT ATACCACTAA TAAATCCTAT TTTATAGCCT CCTTTAATAA GCTGTATTTT
AAAGAAGATC TTTGGCGGGC GCAGGTTTTT TTCGCAGTAG GTAATCAAAA TGCCCAGTTT
TATGTAGATG ATATAGATGT TCCGGATTTT TACGACTACG GATCAAAAAA AACAATACTG
GCTTTTACTT TACAGCATAA AATAATAAAG TCTTTCTATG CCGGCATTGG TTATTCGTAC
GCACATTACA GCACAAATTA TGAAGATAAT GTCAAACCGT CTTCTGTTAC ACATACAAAC
GGTCTGCAGT TAATAATGAT GTACGATACA AGAGATGCCG TTTATTATCC CACAAAAGGT
GATAAAATTA AACTGCGCTG GCTTACTTAT CCGGAATGGT TTGGAAATAC TGCCAGTGCA
AACAAGATAC TTTCAGAATA TAATACCTAT TTTCCTATGC GAAGCGGAAA AGATGTTCTG
GCAGCTCGTT TTTCGGGTAA GTTTGGATTA GGAAATATTG TTTTCGAACA GCAGGTTACT
ATTGGCGGTA ATGATATTAG AGGCTATTCT GAAGGCAAAT ATAGAGGAGA CGGACTTATG
GACCTGCAAG GTGAATACCG TTATAATTTT AATAAAAGAA TGGGATTAGT CGGCTTTGCC
GGAATAGCTA CTATTTATGG CTCCGAGAAT AAAGATTTTG ATTGGAAATT ATACCCTGGA
GCCGGAGTTG GATATCGTTA CAGAGCATTT AAAAATGAAA AATTTAATAT AGGTCTGGAC
GGTGCTGTTG GAAAAGGAGA CTGGGGAATT TATTTTCGCA TAGGTGAAGC TTTTTAA
 
Protein sequence
MKKMLLFSLM LFLWYSWGWT QEKQTDSTKS SVEKTKNIDF NVMPYLNYNR TLDFMFGAIP 
MMMYKFDKTD TISPKSLSGL SAVYTTNKSY FIASFNKLYF KEDLWRAQVF FAVGNQNAQF
YVDDIDVPDF YDYGSKKTIL AFTLQHKIIK SFYAGIGYSY AHYSTNYEDN VKPSSVTHTN
GLQLIMMYDT RDAVYYPTKG DKIKLRWLTY PEWFGNTASA NKILSEYNTY FPMRSGKDVL
AARFSGKFGL GNIVFEQQVT IGGNDIRGYS EGKYRGDGLM DLQGEYRYNF NKRMGLVGFA
GIATIYGSEN KDFDWKLYPG AGVGYRYRAF KNEKFNIGLD GAVGKGDWGI YFRIGEAF