Gene Fjoh_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3330 
Symbol 
ID5092937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3978842 
End bp3979537 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content37% 
IMG OID644742757 
ProductABC transporter related 
Protein accessionYP_001195665 
Protein GI146301074 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.237178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACAG CAACAAACCT GACCAAGAAA TATGGCGATC ATACGGCTTT GAATGCCTTA 
AACTTAACAA TAAAAGAAGG TGAAATTTTT GCTCTCTTAG GGCAGAACGG TGCCGGAAAA
ACGACTACCA TTAATTTGTT TTTAGGTTTT ATAGAACCTA CTTCGGGAGA ATTAGAAATC
AATAACATTT CAGTTACAGA GAATAATCAG GAAACCAAAA AACACGTCGC TTATATTCCT
GAAACGGTAA TGTTATACCC AAATCTTACA GGTTTAGAAA ATCTTAAATT CTTTTCGTCG
TTGGCAGGAT TTAAATATTC TACAGGAGAA TTGACTTATT TTTTAACTAA AGCGGGGCTT
CAGGCAGGTG CTCACGATCA AAATTTAGGA GGTTATTCTA AAGGAATGCG TCAAAAAGTG
GGAATTGCAA TTGCCATCGC TAAGAGAGCA AAAGTGCTTT TACTGGACGA ACCTACAAGT
GGCTTAGACC CAAAAGCATC TAACGAATTT TCGCAGATTT TAAAAGAACT TTCGGCAGAC
GGAACGGCTA TTTTAATGGC AACCCACGAT ATTTTCAGAG CGAGAGAAGT CGCTTCGCAC
ATCGGAATTA TGAAACAGGG AAATTTAGTT ACCGTTATTG AAGCTGATAA AATATCAGCA
AATGAACTGG AAGATTTGTA TTTACAAACT GTTTAA
 
Protein sequence
MLTATNLTKK YGDHTALNAL NLTIKEGEIF ALLGQNGAGK TTTINLFLGF IEPTSGELEI 
NNISVTENNQ ETKKHVAYIP ETVMLYPNLT GLENLKFFSS LAGFKYSTGE LTYFLTKAGL
QAGAHDQNLG GYSKGMRQKV GIAIAIAKRA KVLLLDEPTS GLDPKASNEF SQILKELSAD
GTAILMATHD IFRAREVASH IGIMKQGNLV TVIEADKISA NELEDLYLQT V