Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3330 |
Symbol | |
ID | 5092937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3978842 |
End bp | 3979537 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644742757 |
Product | ABC transporter related |
Protein accession | YP_001195665 |
Protein GI | 146301074 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.237178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACAG CAACAAACCT GACCAAGAAA TATGGCGATC ATACGGCTTT GAATGCCTTA AACTTAACAA TAAAAGAAGG TGAAATTTTT GCTCTCTTAG GGCAGAACGG TGCCGGAAAA ACGACTACCA TTAATTTGTT TTTAGGTTTT ATAGAACCTA CTTCGGGAGA ATTAGAAATC AATAACATTT CAGTTACAGA GAATAATCAG GAAACCAAAA AACACGTCGC TTATATTCCT GAAACGGTAA TGTTATACCC AAATCTTACA GGTTTAGAAA ATCTTAAATT CTTTTCGTCG TTGGCAGGAT TTAAATATTC TACAGGAGAA TTGACTTATT TTTTAACTAA AGCGGGGCTT CAGGCAGGTG CTCACGATCA AAATTTAGGA GGTTATTCTA AAGGAATGCG TCAAAAAGTG GGAATTGCAA TTGCCATCGC TAAGAGAGCA AAAGTGCTTT TACTGGACGA ACCTACAAGT GGCTTAGACC CAAAAGCATC TAACGAATTT TCGCAGATTT TAAAAGAACT TTCGGCAGAC GGAACGGCTA TTTTAATGGC AACCCACGAT ATTTTCAGAG CGAGAGAAGT CGCTTCGCAC ATCGGAATTA TGAAACAGGG AAATTTAGTT ACCGTTATTG AAGCTGATAA AATATCAGCA AATGAACTGG AAGATTTGTA TTTACAAACT GTTTAA
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Protein sequence | MLTATNLTKK YGDHTALNAL NLTIKEGEIF ALLGQNGAGK TTTINLFLGF IEPTSGELEI NNISVTENNQ ETKKHVAYIP ETVMLYPNLT GLENLKFFSS LAGFKYSTGE LTYFLTKAGL QAGAHDQNLG GYSKGMRQKV GIAIAIAKRA KVLLLDEPTS GLDPKASNEF SQILKELSAD GTAILMATHD IFRAREVASH IGIMKQGNLV TVIEADKISA NELEDLYLQT V
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